lazear / mz_parquet
☆13Updated 7 months ago
Alternatives and similar repositories for mz_parquet:
Users that are interested in mz_parquet are comparing it to the libraries listed below
- A Python interface to proteomics data repositories☆34Updated last month
- Fast and flexible semi-supervised learning for peptide detection in Python☆43Updated 2 months ago
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆27Updated 5 months ago
- ☆25Updated this week
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆27Updated last week
- Python client for PRIDE Archive Rest API.☆23Updated last week
- A python package for fast post translational modification localization, powered by Cython.☆19Updated last year
- ☆15Updated 3 years ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆23Updated 3 weeks ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆20Updated this week
- R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Updated 11 months ago
- ☆37Updated last month
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆46Updated this week
- This repository attempts to implement a neural net that leverages the transformer architecture to predict peptide properties (retention t…☆10Updated 5 months ago
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 2 years ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆42Updated this week
- MSBooster allows users to add deep learning-based features to .pin files before Percolator PSM rescoring☆17Updated this week
- A library for deisotoping and charge state deconvolution of complex mass spectra☆36Updated 3 months ago
- A collection of common mz values found in mass spectrometry.☆19Updated 10 months ago
- ☆14Updated 3 years ago
- ProXL Web App -- Visualize and Share Protein Cross-linking Data☆12Updated 9 months ago
- Instrument Application Programming Interface☆46Updated 2 months ago
- An open-source Python package to unify raw MS data accession and storage.☆23Updated last week
- The Multiplierz Proteomics Library☆24Updated last year
- EasyPQP: Simple library generation for OpenSWATH☆11Updated 2 months ago
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆12Updated 3 years ago
- ☆25Updated last year
- A package to cluster and visualise MS/MS spectral data☆11Updated 4 years ago
- ☆14Updated 2 years ago
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆28Updated last month