stephenslab / gtexresultsLinks
Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic studies with multiple conditions."
☆24Updated 2 years ago
Alternatives and similar repositories for gtexresults
Users that are interested in gtexresults are comparing it to the libraries listed below
Sorting:
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Get SNP proxies from the 1000 Genomes Project.☆31Updated 7 years ago
- ☆10Updated 3 years ago
- software package for integrative genetic association analysis☆35Updated 2 years ago
- A set of tools for accurate quantitation of single-cell allele-specific expression☆13Updated 3 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆20Updated 2 years ago
- ☆10Updated 6 years ago
- A small R package to make sequencing read coverage plots in R.☆40Updated last month
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated 2 months ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 5 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 8 years ago
- An R package for generating comparative regional association plots☆18Updated 4 months ago
- countsimQC - Compare characteristic features of count data sets☆30Updated this week
- Pairwise Hierarchical Model☆20Updated 3 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆11Updated 2 years ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 5 years ago
- Integrating zingeR with ZINB-WaVE weights☆26Updated 7 years ago
- Code for creating cell-type-specific regulatory element annotation files☆19Updated last year
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 5 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆33Updated 5 years ago
- HSCI/Catalyst Single-cell RNA-Seq Workshop☆19Updated 6 years ago
- Learn tissue-specificity and tissue-sharing of genetic regulation across 49 tissues using constraint matrix factorization model☆22Updated 5 years ago
- Examples of kallisto + sleuth☆11Updated 8 years ago
- zero-inflated negative binomial gene expression in R☆20Updated 8 years ago
- Sample code for ldsc analyses in UKBB☆33Updated 2 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆32Updated 4 months ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 7 years ago