Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic studies with multiple conditions."
☆25Apr 25, 2023Updated 3 years ago
Alternatives and similar repositories for gtexresults
Users that are interested in gtexresults are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- In-house computational biology workflows at Columbia Neurology☆36Sep 7, 2025Updated 10 months ago
- An R package for multivariate adaptive shrinkage.☆99Nov 7, 2024Updated last year
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆49Dec 16, 2024Updated last year
- Repository for the Epigenomics Tutorial hold at ISMB 2017 in Prague☆14Aug 19, 2020Updated 5 years ago
- Effective Computing—Resources for Computational Biologists☆26Apr 17, 2020Updated 6 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- R package for fast maximum-likelihood estimation of mixture proportions using SQP.☆11Dec 21, 2023Updated 2 years ago
- A faster and angrier package for EBMF.☆17Jul 1, 2026Updated 3 weeks ago
- Committee Meeting Reports - LaTeX☆11Jun 11, 2018Updated 8 years ago
- software package for integrative genetic association analysis☆37Jul 8, 2023Updated 3 years ago
- Code and analyses from "FDR: A New Deal" paper☆15Apr 18, 2017Updated 9 years ago
- Fast API server for calculating linkage disequilibrium☆20Apr 24, 2025Updated last year
- GTEx analysis scripts☆20Mar 14, 2017Updated 9 years ago
- Enhanced version of the FastQTL QTL mapper☆72Mar 19, 2023Updated 3 years ago
- Parallel programming with Python exercises☆13Feb 18, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Various Ideas for Confounder Adjustment in Regression☆24May 8, 2023Updated 3 years ago
- Analyzing chromatin accessibility data in R☆19Jun 23, 2023Updated 3 years ago
- Create regional association plots from GWAS or meta-analysis☆64Jan 21, 2020Updated 6 years ago
- R package for Empirical Bayes Factor Analysis.☆54Dec 4, 2024Updated last year
- Materials presented at the BiocNYC meet-up☆12Nov 29, 2018Updated 7 years ago
- A browser extension and web application for extracting gene sets from GEO and piping them to Enrichr.☆15May 1, 2023Updated 3 years ago
- RSS: Regression with Summary Statistics☆51Sep 16, 2024Updated last year
- Multivariate adaptive shrinkage methods used for analysis GTEx data in Urbut et al (2017).☆12Sep 25, 2017Updated 8 years ago
- Dynamic statistical comparisons in R☆17Jun 29, 2018Updated 8 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Read PLINK BED/BIM/FAM files into R☆44Jul 26, 2021Updated 4 years ago
- BioCarta pathway images☆11Jan 30, 2026Updated 5 months ago
- Code associated with MIX-seq manuscript☆15Aug 26, 2020Updated 5 years ago
- Colocalization analysis of genetic association signals☆60Jun 13, 2025Updated last year
- Integrating zingeR with ZINB-WaVE weights☆26Feb 15, 2018Updated 8 years ago
- cEll tyPe enrIChment☆17Dec 11, 2022Updated 3 years ago
- home of the bear's lair☆10May 19, 2017Updated 9 years ago
- "Dissecting cell-type composition and activity-dependent transcriptional state in mammalian brains by massively parallel single-nucleus R…☆13Jan 7, 2018Updated 8 years ago
- Causal Variant Evidence Mapping with Non-parametric resampling☆12Dec 16, 2020Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Platform for Interactive analysis and Visualization Of Transcriptomics data☆26Jun 9, 2020Updated 6 years ago
- Code and Data to accompany "Dilated Convolutions for Modeling Long-Distance Genomic Dependencies", presented at the ICML 2017 Workshop on…☆30Oct 3, 2017Updated 8 years ago
- Tissue of ACTion scores for Investigating Complex trait-Associated Loci☆13Mar 27, 2021Updated 5 years ago
- Predict cell cycle phase in a continuum from single-cell RNA-seq data☆14Nov 14, 2020Updated 5 years ago
- logistic factor analysis☆16Jan 29, 2026Updated 5 months ago
- GTEx & TOPMed data production and analysis pipelines☆409Sep 14, 2025Updated 10 months ago
- friendly command-line tool for initializing python packages☆18Jun 24, 2020Updated 6 years ago