stephenslab / gtexresultsLinks
Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic studies with multiple conditions."
☆24Updated 2 years ago
Alternatives and similar repositories for gtexresults
Users that are interested in gtexresults are comparing it to the libraries listed below
Sorting:
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- countsimQC - Compare characteristic features of count data sets☆28Updated 2 months ago
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 4 years ago
- ☆10Updated 2 years ago
- ☆10Updated 6 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- A set of tools for accurate quantitation of single-cell allele-specific expression☆12Updated 2 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated 2 years ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated last year
- A small R package to make sequencing read coverage plots in R.☆39Updated 3 years ago
- zero-inflated negative binomial gene expression in R☆20Updated 7 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 4 years ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆11Updated 2 years ago
- Examples of kallisto + sleuth☆11Updated 8 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated 2 years ago
- Repository for supplemental material of manuscripts☆18Updated 4 years ago
- R package for benchmarking single cell analysis methods☆32Updated last year
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- Pairwise Hierarchical Model☆19Updated 3 years ago
- ☆29Updated last year
- Non-official Git repository for R package cellrangerRkit (currently not available elsewhere; I'm not affiliated with 10x)☆19Updated 6 years ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Get SNP proxies from the 1000 Genomes Project.☆30Updated 6 years ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 5 years ago
- Workshop for CNV analysis with Bioconductor☆17Updated 8 months ago