jnovembre / BSD-QBio6Links
UChicago BSD Quantitative Bootcamp 2020
☆11Updated 4 years ago
Alternatives and similar repositories for BSD-QBio6
Users that are interested in BSD-QBio6 are comparing it to the libraries listed below
Sorting:
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 6 years ago
- Examples of kallisto + sleuth☆11Updated 8 years ago
- Intro to workflows for efficient automated data analysis, using snakemake.☆32Updated 6 years ago
- Genetics training camp☆21Updated 5 years ago
- snp.plotter is an R package that creates publishable-quality plots of p-values using single SNP and/or haplotype data.☆19Updated last year
- Project Organization and Management for Genomics☆25Updated last week
- Transcript quantification import with automatic metadata detection☆67Updated this week
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated 2 months ago
- Short example showing how to calculate and plot a 2D t-SNE projection from mass cytometry data in R☆17Updated 9 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 10 years ago
- home of the bear's lair☆10Updated 8 years ago
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆21Updated 4 months ago
- TOP results by CONfident efFECT Sizes.☆14Updated 9 months ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- A small R package to make sequencing read coverage plots in R.☆39Updated 3 years ago
- Genomics Workshop Overview☆47Updated this week
- Data Wrangling and Processing for Genomics☆71Updated last week
- A flexible python program for generating figures from regions of the genome.☆13Updated 6 years ago
- zero-inflated negative binomial gene expression in R☆20Updated 7 years ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 8 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- ☆17Updated last year
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆21Updated last week
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 6 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- Glimma R package☆50Updated last year
- Code for performing PCA followed by CCA☆18Updated 6 years ago
- Effective Computing—Resources for Computational Biologists☆26Updated 5 years ago
- Code used for the single-cell RNA-Seq batch effects paper☆10Updated 8 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year