BaderLab / EnrichmentMapAppLinks
The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.
☆34Updated 9 months ago
Alternatives and similar repositories for EnrichmentMapApp
Users that are interested in EnrichmentMapApp are comparing it to the libraries listed below
Sorting:
- R interface to genome annotation files and the UCSC genome browser☆33Updated 3 months ago
- This is the ensembldb development repository.☆35Updated 10 months ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated 2 weeks ago
- anor: an annotation and visualization system based on R and Shiny framework☆33Updated 5 years ago
- An interactive learning resource for next-generation sequencing (NGS) techniques☆29Updated 6 years ago
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆22Updated 2 weeks ago
- gkmSVM R package☆17Updated 7 years ago
- ☆27Updated 2 years ago
- JAMM Peak Finder for Sequencing Datasets☆29Updated 5 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- Statistical power studies for multi-omics experiments.☆32Updated 5 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Differential expression and allelic analysis, nonparametric statistics☆29Updated 6 months ago
- Proteomics label-free quantification (LFQ) analysis pipeline☆35Updated 6 months ago
- Quick access to gene synonyms☆28Updated this week
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- Annotation of Genetic Variants☆29Updated 3 weeks ago
- The KEGGgraph package to parse KEGG pathways in R into graph objects☆14Updated 3 months ago
- Toolbox package for organizing and working with TCGA data☆28Updated this week
- Bioconductor package that makes BIG data pint-sized.☆21Updated last year
- Code and data used to create the JASPAR UCSC Genome Browser tracks data hub☆14Updated 2 years ago
- Create QC and summary reports for Alevin output☆32Updated 3 months ago
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- Reactome Pathway Analysis☆43Updated 3 months ago
- Experimental source code for MAGeCK (Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout)☆18Updated 10 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆37Updated last year
- A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data☆20Updated 4 years ago
- Differential Count Data Analysis Toolbox☆61Updated last year
- Cancer Dependency Map package☆30Updated 11 months ago
- Haystack: Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆47Updated 3 years ago