Visualize cancer genomes with FAIR single-cell RNA-seq data
☆12Jan 5, 2023Updated 3 years ago
Alternatives and similar repositories for The-Broad-Institute-Single-Cell-RNA-Seq-Data-Set
Users that are interested in The-Broad-Institute-Single-Cell-RNA-Seq-Data-Set are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Single cell RNA-seq analysis bundle☆37Sep 13, 2019Updated 6 years ago
- Python framework for single-cell RNA-seq clustering with special focus on transfer learning.☆18Aug 29, 2019Updated 6 years ago
- R package for haplotype phasing using single-cell RNA-seq data☆13Aug 22, 2017Updated 8 years ago
- Self-guided educational workshop for ChIP-Seq and RNA-Seq☆14Sep 15, 2020Updated 5 years ago
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Gene expression viewer template☆11Aug 30, 2017Updated 8 years ago
- We aim to make it easier for biomedical researchers to access and customize synthetic sequence data for the purpose of sharing and testin…☆11Jul 22, 2019Updated 6 years ago
- single cell and bulk RNASeq analysis scripts☆14Jan 13, 2022Updated 4 years ago
- A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics☆13Jan 9, 2026Updated 2 months ago
- The R/Python scripts for the analysis of single-cell RNA-seq data from COVID-19 patients☆10Dec 16, 2020Updated 5 years ago
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Jul 10, 2024Updated last year
- ☆12Jul 6, 2023Updated 2 years ago
- R package for DER Finder, a method for differential expression analysis of RNA-seq data☆22Mar 6, 2015Updated 11 years ago
- 10x single cell RNA-seq data from the developing mouse retina☆16Mar 11, 2021Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- R vignettes for processing BUS format single-cell RNA-seq files☆21Feb 8, 2020Updated 6 years ago
- R Package for phasing of single cell Strand-seq data☆10Jan 14, 2025Updated last year
- K-means clustering for large single-cell datasets☆12Feb 10, 2026Updated last month
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆14Jun 5, 2019Updated 6 years ago
- Analysis of single cell RNA-seq data from innate lympoid cells☆15Aug 8, 2017Updated 8 years ago
- A Toolset for Chromosome X-Wide Association Studies☆12May 1, 2018Updated 7 years ago
- Galaxy container for single cell RNA-Seq tertiary analysis tools☆18Jun 26, 2025Updated 9 months ago
- Snakemake workflow to benchmark scRNA-seq data simulators☆14Aug 10, 2022Updated 3 years ago
- GEO RNA-seq Experiments Processing Pipeline☆22Oct 25, 2019Updated 6 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Load bioinformatics datasets into a local database☆11Apr 8, 2025Updated 11 months ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆31Jul 13, 2023Updated 2 years ago
- R package for WikiPathways API☆19Nov 3, 2025Updated 4 months ago
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆14Aug 17, 2021Updated 4 years ago
- SAFE (Single-cell Aggregated clustering From Ensemble): Cluster ensemble for single-cell RNA-seq data☆18Mar 27, 2021Updated 5 years ago
- Molecular Oncology Almanac, a clinical interpretation algorithm paired with a novel underlying knowledge base for precision cancer medici…☆17Feb 2, 2026Updated last month
- Analysis for 2019 submission "Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis" Schaffli…☆22Jun 17, 2021Updated 4 years ago
- Read, write and format Excel files using R☆15Sep 29, 2025Updated 6 months ago
- R code for single-cell analysis of intestinal epithelial cells☆23Nov 18, 2017Updated 8 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- ☆14Aug 9, 2016Updated 9 years ago
- Lightweight pipeline for processing droplet-based single-cell RNA-seq data☆18Nov 4, 2020Updated 5 years ago
- BED QC tool (in the making)☆18Aug 19, 2022Updated 3 years ago
- RNA seq analysis using Bioconductor (analysis built on limma, edgeR)☆12Sep 23, 2022Updated 3 years ago
- R package to infer spatial location of neuronal subpopulations within the developing mouse brain by integrating single-cell RNA-seq data …☆17Jul 15, 2015Updated 10 years ago
- Perturb-seq analysis package☆16May 2, 2024Updated last year
- Single-cell exploratory data analysis for RNA-Seq☆40Apr 24, 2021Updated 4 years ago