Repository for the Epigenomics Tutorial hold at ISMB 2017 in Prague
☆14Aug 19, 2020Updated 5 years ago
Alternatives and similar repositories for EpigenomicsTutorial-ISMB2017
Users that are interested in EpigenomicsTutorial-ISMB2017 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ATAC-seq lab for BIOINF525☆10Mar 31, 2016Updated 10 years ago
- Materials presented at the BiocNYC meet-up☆12Nov 29, 2018Updated 7 years ago
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆24Apr 25, 2023Updated 3 years ago
- Annotation of genomic regions using transcription factor binding sites and epigenetic data☆41Apr 26, 2022Updated 4 years ago
- ATACseqQC tutorials for BioC 2019 workshop☆19Jul 28, 2020Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆26Nov 17, 2022Updated 3 years ago
- ☆10Oct 17, 2019Updated 6 years ago
- A Spike-in Free ChIP-Seq Normalization Approach for Detecting Global Changes in Histone Modifications☆42Feb 22, 2022Updated 4 years ago
- Data science in R notes☆15Apr 28, 2025Updated last year
- A toolkit for working with ATAC-seq data.☆24Jan 22, 2026Updated 4 months ago
- Notes on ChIP-seq and other-seq-related tools☆26Feb 6, 2026Updated 4 months ago
- ☆17Jan 3, 2019Updated 7 years ago
- ☆16Jan 2, 2024Updated 2 years ago
- DistMap☆14Nov 23, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Analytical pipeline developed to anlayze Cut and Run data. Inspired by both Henikoff (SEACR) and Orkin (Cut&RunTools) lab pipelines.☆20May 26, 2025Updated last year
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆25Aug 17, 2016Updated 9 years ago
- Code relevant to sci-ATAC-seq of Drosophila embryogenesis.☆22Jun 9, 2019Updated 6 years ago
- A toolkit for QC and visualization of ATAC-seq results.☆75Jan 8, 2025Updated last year
- This is the package of Yuanfang's winning algorithm in the ENCODE-DREAM in vivo Transcription Factor Binding Site Prediction Challenge☆20Jun 11, 2020Updated 5 years ago
- Code to run OncoSig Analyses☆18Sep 30, 2020Updated 5 years ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆25Feb 1, 2020Updated 6 years ago
- A DL-based framework for sequence and shape motif identification in the human genome☆12May 26, 2023Updated 3 years ago
- scRNA-seq workshop in Oxford on 9 September 2016☆11Sep 7, 2016Updated 9 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Identify Intra-, Inter-donor variations in bulk or single cell longitudinal dataset☆27Jul 31, 2023Updated 2 years ago
- 😠 Jupyter Widget bindings for UpSet.js for rendering UpSet plots, Euler, and Venn Diagrams☆14Jan 17, 2026Updated 4 months ago
- ChIP-seq and ATAC-seq analysis☆13Jun 17, 2024Updated last year
- R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)☆25May 12, 2025Updated last year
- ☆18Feb 24, 2017Updated 9 years ago
- 🚬前端自动化测试理论到实战☆12Apr 20, 2021Updated 5 years ago
- (FORK) Becoming better at DATA SCIENCE every day☆10Jan 14, 2022Updated 4 years ago
- RNA-seq analysis scripts☆18Jan 8, 2026Updated 5 months ago
- ATAC-seq Pipeline in conjunction with Duygu Ucar & Jacques Banchereau Laboratories☆12Apr 3, 2019Updated 7 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Analysis pipeline for CUT&RUN and CUT&TAG experiments that includes QC, support for spike-ins, IgG controls, peak calling and downstream …☆111May 14, 2026Updated 3 weeks ago
- Energy-based Graph Convolutional Networks for Scoring Protein Docking Models☆12Aug 31, 2021Updated 4 years ago
- A short tutorial to using DL and keras for genomics with sequence data.☆15Dec 3, 2020Updated 5 years ago
- Workshop material for BioC Asia 2019☆13Dec 22, 2021Updated 4 years ago
- R package to easily generate "V-plots" of paired-end sequencing data over regions of interest☆11Dec 1, 2023Updated 2 years ago
- Collection of R functions used in the Hochwagen Lab☆12Aug 4, 2025Updated 10 months ago
- DRUGZ software☆24Aug 9, 2021Updated 4 years ago