kimpenn / PIVOTLinks
Platform for Interactive analysis and Visualization Of Transcriptomics data
☆27Updated 5 years ago
Alternatives and similar repositories for PIVOT
Users that are interested in PIVOT are comparing it to the libraries listed below
Sorting:
- Transcript quantification import with automatic metadata detection☆68Updated 3 weeks ago
- Differential Count Data Analysis Toolbox☆61Updated last year
- Glimma R package☆50Updated 10 months ago
- SeqPlots - An interactive tool for visualizing NGS signals and sequence motif densities along genomic features using average plots and he…☆87Updated 3 years ago
- Transcript quantification import for modular pipelines☆140Updated 2 weeks ago
- An interactive web-tool for RNA-seq analysis☆68Updated 5 months ago
- R package for bcbio RNA-seq analysis.☆62Updated 10 months ago
- Reactome Pathway Analysis☆43Updated 3 months ago
- Rna-seq pipeline, From FASTQ to differential expression analysis...☆21Updated 8 years ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated last year
- 2018 Bioconductor Workshops☆76Updated 6 years ago
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago
- ☆35Updated 9 years ago
- Run Picard on BAM files and collate 90 metrics into one file.☆41Updated 7 years ago
- Student website repo for 2015/2016 Canadian Bioinformatics Workshops☆34Updated 2 years ago
- A small R package to make sequencing read coverage plots in R.☆39Updated 3 years ago
- ☆61Updated 4 years ago
- Course material for introductory R / Bioconductor courses☆44Updated 2 years ago
- Grid and ggplot2 based visualization for biological data☆113Updated last year
- R package for genomic feature analysis and visualization☆79Updated 3 months ago
- Companion repo for ExAC paper, 2015☆33Updated 8 years ago
- Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing.☆69Updated 3 years ago
- ☆29Updated 5 years ago
- RNA-Sequencing data differential expression analysis pipeline. Performs: genome coverage (via bedtools and HTSeq), generates Circos code …☆55Updated 12 years ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆34Updated 7 years ago
- Bioinformatics analysis scripts, workflows, general code examples☆54Updated 4 years ago
- Classifies genes as an oncogene, tumor suppressor gene, or as a non-driver gene by using Random Forests☆49Updated 11 months ago
- Locus Overlap Analysis: Enrichment of Genomic Ranges☆78Updated 4 years ago
- Representation and manipulation of genomic intervals☆46Updated 3 weeks ago
- Analysis pipeline for cancer sequencing data☆110Updated 2 months ago