RSS: Regression with Summary Statistics
☆51Sep 16, 2024Updated last year
Alternatives and similar repositories for rss
Users that are interested in rss are comparing it to the libraries listed below
Sorting:
- ldshrink: a one-stop R package for shrinkage estimation of linkage disequilibrium☆13Mar 31, 2021Updated 4 years ago
- RSS-NET: Regression with Summary Statistics exploiting Network Topology☆19Apr 23, 2025Updated 10 months ago
- Multivariate adaptive shrinkage methods used for analysis GTEx data in Urbut et al (2017).☆12Sep 25, 2017Updated 8 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Jun 29, 2022Updated 3 years ago
- ☆24Aug 6, 2021Updated 4 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆48Aug 30, 2023Updated 2 years ago
- R package for Empirical Bayes Factor Analysis.☆52Dec 4, 2024Updated last year
- ☆34Mar 7, 2021Updated 5 years ago
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆24Apr 25, 2023Updated 2 years ago
- ☆45Jul 7, 2016Updated 9 years ago
- Implemention of Accurate estimation of SNP-heritability from biobank-scale data irrespective of genetic architecture. (Nature Genetics 20…☆15Sep 5, 2019Updated 6 years ago
- polygenic scores using variational inference on GWAS summary statistics from multiple cohorts☆11Dec 7, 2022Updated 3 years ago
- LD Score Regression (LDSC)☆768Jan 16, 2026Updated 2 months ago
- A new model and algorithm for multivariate Bayesian variable selection regression.☆26Updated this week
- causal TWAS (cTWAS)☆47Mar 3, 2026Updated 2 weeks ago
- An R package for plotting GWAS results from the GAPIT package☆14Oct 9, 2025Updated 5 months ago
- Fine-mapping pipeline for Open Targets Genetics☆28Sep 6, 2022Updated 3 years ago
- Scalable Ultra-Sparse Bayesian PCA☆33Feb 13, 2024Updated 2 years ago
- Predict cell cycle phase in a continuum from single-cell RNA-seq data☆13Nov 14, 2020Updated 5 years ago
- ☆14Jul 18, 2021Updated 4 years ago
- PrediXcan Project☆117Oct 17, 2022Updated 3 years ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆53Feb 1, 2019Updated 7 years ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Feb 27, 2020Updated 6 years ago
- Create regional association plots from GWAS or meta-analysis☆64Jan 21, 2020Updated 6 years ago
- Statistical properties of polygenic risk scores☆19Oct 16, 2019Updated 6 years ago
- ☆93Jul 21, 2025Updated 7 months ago
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Oct 5, 2017Updated 8 years ago
- Various Ideas for Confounder Adjustment in Regression☆24May 8, 2023Updated 2 years ago
- Effective Computing—Resources for Computational Biologists☆27Apr 17, 2020Updated 5 years ago
- Fast API server for calculating linkage disequilibrium☆20Apr 24, 2025Updated 10 months ago
- GridLMM package☆39Oct 16, 2025Updated 5 months ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 5 years ago
- Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …☆30Jun 18, 2023Updated 2 years ago
- An R package for Poisson multivariate adaptive shrinkage.☆11Apr 15, 2024Updated last year
- ☆15Nov 17, 2025Updated 4 months ago
- GENI plots to visualise results from genome-wide association studies☆31Oct 14, 2024Updated last year
- An R package for adaptive shrinkage☆87Jul 24, 2025Updated 7 months ago
- Quantitative Trait Cluster Association Test in R☆26Apr 19, 2021Updated 4 years ago
- QTL analysis software for high-dimensional data and complex cross designs☆38Feb 28, 2026Updated 2 weeks ago