cumc / bioworkflowsLinks
In-house computational biology workflows at Columbia Neurology
☆34Updated last year
Alternatives and similar repositories for bioworkflows
Users that are interested in bioworkflows are comparing it to the libraries listed below
Sorting:
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆41Updated 8 months ago
- ☆48Updated 3 months ago
- ☆35Updated 2 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆33Updated 5 years ago
- Statistical fine-mapping pipeline in FinnGen☆30Updated 2 months ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆46Updated last year
- R package for testing and visualizing gene list overlaps☆19Updated 9 years ago
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆13Updated last year
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Updated 3 years ago
- Phenome Exome Association and Correlation Of Key phenotypes☆27Updated 4 years ago
- ☆20Updated 2 years ago
- Code supporting analyses in paper on fine-mapping AD loci☆16Updated 4 years ago
- ☆23Updated last month
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 5 years ago
- DEPICT code, instructions and an example☆50Updated 3 years ago
- FLAMES: Accurate gene prioritization in GWAS loci☆41Updated 5 months ago
- Colocalization analysis of genetic association signals☆52Updated 2 months ago
- causal TWAS (cTWAS)☆45Updated last week
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆40Updated 2 years ago
- ☆23Updated 4 years ago
- Primo☆16Updated 3 years ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated last year
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated this week
- R package for reading in & working with NucleoATAC outputs☆26Updated 6 years ago
- This is the repository accompanying the pre-print titled, "Genome-wide analyses of 200,453 individuals yield new insights into the causes…☆13Updated 3 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated 2 years ago
- Scripts used for generating Neale Lab UKB results☆20Updated 2 years ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆52Updated 5 months ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆19Updated last week