omicsCore / scTyperLinks
scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data
☆30Updated 2 years ago
Alternatives and similar repositories for scTyper
Users that are interested in scTyper are comparing it to the libraries listed below
Sorting:
- A robust and accurate cell type classifier for single cell RNA-seq data☆16Updated 2 years ago
- scWGCNA☆61Updated 2 years ago
- ☆18Updated last year
- ☆37Updated last year
- Single cell RNA-seq analysis bundle☆35Updated 5 years ago
- ☆49Updated last year
- scRNA-seq cell type identification☆43Updated 5 years ago
- ☆32Updated 6 months ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- Functions for single cell data analysis☆32Updated 4 years ago
- ☆32Updated 4 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated 9 months ago
- ☆47Updated 6 months ago
- ☆33Updated 6 years ago
- ☆13Updated last year
- ☆18Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆27Updated 3 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- ☆29Updated 9 months ago
- ☆50Updated 5 years ago
- ☆39Updated 4 years ago
- A pipeline for scRNA-seq data analysis☆14Updated 4 months ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- Analytical tools and pipelines for bulk and single cell epigenomic and human genetic data☆27Updated 4 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆37Updated 4 years ago
- Single-cell Case Control Analysis☆51Updated 8 months ago
- R package of CSOmap(developing☆14Updated 3 years ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆22Updated last year
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 4 months ago
- Correlation-Based Feature Selection for Single-Cell RNA Sequencing Data☆19Updated 3 years ago