omicsCore / scTyperLinks
scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data
☆31Updated 3 years ago
Alternatives and similar repositories for scTyper
Users that are interested in scTyper are comparing it to the libraries listed below
Sorting:
- scWGCNA☆61Updated 3 years ago
- ☆32Updated 11 months ago
- ☆39Updated 4 months ago
- ☆18Updated last year
- ☆53Updated last year
- scRNA-seq cell type identification☆43Updated 6 years ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆17Updated 2 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- ☆48Updated last year
- ☆33Updated 4 years ago
- ☆39Updated 4 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆44Updated 4 years ago
- ☆50Updated 5 years ago
- Single cell RNA-seq analysis bundle☆37Updated 6 years ago
- ☆25Updated 2 months ago
- Feature Ranking in (possibly large) Clustered Single Cell Data☆40Updated 4 years ago
- ☆15Updated last year
- ☆47Updated 5 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated last year
- Correlation-Based Feature Selection for Single-Cell RNA Sequencing Data☆20Updated 3 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆45Updated 2 years ago
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 5 years ago
- ☆34Updated 6 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated 4 months ago
- A pipeline for scRNA-seq data analysis☆15Updated 9 months ago
- Functional Inference of Gene Regulation☆49Updated last year
- Single-cell Case Control Analysis☆52Updated 3 weeks ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆32Updated last year
- R package of CSOmap(developing☆13Updated 3 years ago
- mutation(barcode) caller for 10x single cell data☆44Updated 5 years ago