omicsCore / scTyperLinks
scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data
☆31Updated 2 years ago
Alternatives and similar repositories for scTyper
Users that are interested in scTyper are comparing it to the libraries listed below
Sorting:
- ☆39Updated 3 months ago
- ☆18Updated last year
- ☆32Updated 10 months ago
- scWGCNA☆61Updated 3 years ago
- ☆52Updated last year
- A robust and accurate cell type classifier for single cell RNA-seq data☆17Updated 2 years ago
- ☆14Updated last year
- scRNA-seq cell type identification☆43Updated 6 years ago
- ☆34Updated 6 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- ☆32Updated 4 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated last year
- R package of CSOmap(developing☆13Updated 3 years ago
- ☆47Updated 10 months ago
- ☆39Updated 4 years ago
- Functional Inference of Gene Regulation☆49Updated last year
- ☆50Updated 5 years ago
- Single cell RNA-seq analysis bundle☆37Updated 6 years ago
- Functions for single cell data analysis☆32Updated 4 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- Single-cell Case Control Analysis☆52Updated last week
- R package to detect breakpoints and assign somies to scATAC-seq data☆42Updated 3 weeks ago
- ☆25Updated last month
- R package for robust clustering of single cell RNA sequencing data☆36Updated last year
- Inferring CNV data from single cell ATAC seq☆25Updated 5 months ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 4 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆29Updated 3 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 8 months ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆43Updated 3 years ago
- ☆47Updated 5 years ago