Alternatives and similar repositories for Asgard

Users that are interested in Asgard are comparing it to the libraries listed below

• Teichlab / drug2cell
  Gene group activity utility functions for Scanpy
  ☆97Updated 11 months ago
• mcgilldinglab / UNAGI
  UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations.
  ☆43Updated 3 weeks ago
• Durenlab / LINGER
  ☆119Updated 6 months ago
• GuangyuWangLab2021 / cellDancer
  Predict RNA velocity through deep learning
  ☆71Updated last year
• madilabcode / scNET
  ☆58Updated 2 months ago
• SONGDONGYUAN1994 / scDesign3
  scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics
  ☆109Updated 2 months ago
• ImmucanWP7 / immucan-scdb
  ☆17Updated 2 years ago
• Roy-lab / scMTNI
  ☆30Updated 4 months ago
• icbi-lab / luca
  Single-cell Lung Cancer Atlas with 1.2M cells
  ☆82Updated 10 months ago
• yjgeno / GenKI
  ☆19Updated last year
• cliffren / PENCIL
  PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.
  ☆28Updated last year
• wallet-maker / cytopus
  Single cell omics biology annotations
  ☆50Updated 7 months ago
• saezlab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆102Updated 2 years ago
• xiaoyeye / TFvelo
  ☆46Updated last year
• OSU-BMBL / scDEAL
  Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
  ☆57Updated last year
• SchubertLab / mvTCR
  ☆56Updated last year
• BorchLab / Trex
  Using TCR and expression for sequence embedding
  ☆60Updated 3 months ago
• Teichlab / cellhint
  A tool for semi-automatic cell type harmonization and integration
  ☆115Updated last month
• KlugerLab / GeneTrajectory
  R implementation of GeneTrajectory
  ☆65Updated last year
• ZJUFanLab / scSpace
  an integrative algorithm to distinguish spatially variable cell subclusters by reconstructing cells onto a pseudo space with spatial tran…
  ☆23Updated 2 years ago
• datapplab / AutoClass
  ☆43Updated 3 years ago
• alexyermanos / Platypus
  R package for the analysis of single-cell immune repertoires
  ☆43Updated 9 months ago
• cailab-tamu / scTenifoldKnk
  R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.
  ☆91Updated 2 months ago
• cistrome / MIRA
  Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.
  ☆66Updated 4 months ago
• KChen-lab / METAFlux
  ☆78Updated last year
• omnideconv / omnideconv
  Unified access to several second-generation deconvolution methods
  ☆88Updated last month
• quadbio / scMultiome_analysis_vignette
  Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis
  ☆68Updated last year
• snehamitra / SCARlink
  ☆59Updated 5 months ago
• ZJUFanLab / scNiche
  a computational framework to identify and characterize cell niches from spatial omics data at single-cell resolution
  ☆44Updated 3 months ago
• TencentAILabHealthcare / scTranslator
  ☆62Updated 3 months ago