Alternatives and similar repositories for Asgard

Users that are interested in Asgard are comparing it to the libraries listed below

• mcgilldinglab / UNAGI
  UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations.
  ☆48Updated this week
• yjgeno / GenKI
  ☆22Updated last year
• Teichlab / drug2cell
  Gene group activity utility functions for Scanpy
  ☆99Updated last year
• Durenlab / LINGER
  ☆122Updated 7 months ago
• SONGDONGYUAN1994 / scDesign3
  scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics
  ☆112Updated 3 months ago
• KlugerLab / GeneTrajectory
  R implementation of GeneTrajectory
  ☆69Updated last year
• cliffren / PENCIL
  PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.
  ☆28Updated last year
• Roy-lab / scMTNI
  ☆31Updated 5 months ago
• GuangyuWangLab2021 / cellDancer
  Predict RNA velocity through deep learning
  ☆71Updated 2 years ago
• KChen-lab / METAFlux
  ☆81Updated last year
• wallet-maker / cytopus
  Single cell omics biology annotations
  ☆51Updated 8 months ago
• icbi-lab / luca
  Single-cell Lung Cancer Atlas with 1.2M cells
  ☆85Updated 11 months ago
• BorchLab / Trex
  Using TCR and expression for sequence embedding
  ☆62Updated last week
• OSU-BMBL / scDEAL
  Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
  ☆58Updated last year
• saezlab / visium_heart
  Spatial transcriptomics of heart tissue
  ☆106Updated 2 years ago
• SchubertLab / mvTCR
  ☆56Updated last year
• omnideconv / omnideconv
  Unified access to several second-generation deconvolution methods
  ☆88Updated last week
• Teichlab / cellhint
  A tool for semi-automatic cell type harmonization and integration
  ☆117Updated 2 months ago
• alexyermanos / Platypus
  R package for the analysis of single-cell immune repertoires
  ☆43Updated 11 months ago
• xiaoyeye / TFvelo
  ☆46Updated last year
• madilabcode / scNET
  ☆59Updated 3 weeks ago
• cailab-tamu / scTenifoldKnk
  R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.
  ☆124Updated 3 months ago
• ZJUFanLab / scRank
  A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…
  ☆62Updated 2 months ago
• ImmucanWP7 / immucan-scdb
  ☆17Updated 2 years ago
• TencentAILabHealthcare / scTranslator
  ☆76Updated 4 months ago
• quadbio / scMultiome_analysis_vignette
  Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis
  ☆68Updated last year
• s175573 / GIANA
  Ultrafast TCR clustering algorithm based on geometric isometry
  ☆71Updated last year
• shmohammadi86 / ACTIONet
  ACTIONet single-cell analysis framework
  ☆44Updated last year
• gabrielakinker / CCLE_heterogeneity
  ☆61Updated 2 years ago
• broadinstitute / Celligner_ms
  Code related to the Celligner manuscript
  ☆46Updated 5 years ago