Alternatives and similar repositories for Asgard

Users that are interested in Asgard are comparing it to the libraries listed below

• Teichlab / drug2cell
  Gene group activity utility functions for Scanpy
  ☆76Updated 5 months ago
• ZJUFanLab / scRank
  A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…
  ☆47Updated 9 months ago
• KChen-lab / METAFlux
  ☆65Updated 11 months ago
• KlugerLab / GeneTrajectory
  R implementation of GeneTrajectory
  ☆58Updated last year
• SmritiChawla / Precily
  ☆30Updated 2 years ago
• yjgeno / GenKI
  ☆15Updated last year
• WanluLiuLab / scAtlasVAE
  ☆35Updated 3 months ago
• xiaoyeye / TFvelo
  ☆44Updated last year
• cliffren / PENCIL
  PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.
  ☆28Updated last year
• mcgilldinglab / scSemiProfiler
  A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…
  ☆24Updated last month
• Junjie-Hu / NSCLC-immunotherapy
  ☆23Updated last year
• wallet-maker / cytopus
  Single cell omics biology annotations
  ☆51Updated last month
• GuangyuWangLab2021 / cellDancer
  Predict RNA velocity through deep learning
  ☆69Updated last year
• BorchLab / Trex
  Using TCR and expression for sequence embedding
  ☆54Updated 3 months ago
• ImmucanWP7 / immucan-scdb
  ☆16Updated last year
• NBISweden / single-cell_sib_scilifelab_2021
  SciLifeLab SIB Summer School for Advanced topics in Single Cell Omics. Site: https://nbisweden.github.io/single-cell_sib_scilifelab_2021/
  ☆23Updated 3 years ago
• broadinstitute / Celligner_ms
  Code related to the Celligner manuscript
  ☆46Updated 4 years ago
• Teichlab / cellhint
  A tool for semi-automatic cell type harmonization and integration
  ☆106Updated 2 months ago
• JinmiaoChenLab / DISCOtoolkit
  ☆30Updated last week
• madilabcode / scNET
  ☆42Updated last week
• JackieHanLab / SenCID
  Senescent Cell Identification
  ☆39Updated last year
• matanhofree / crc-immune-hubs
  Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…
  ☆39Updated 3 years ago
• cistrome / MIRA
  Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.
  ☆61Updated last year
• SchubertLab / mvTCR
  ☆51Updated 6 months ago
• snehamitra / SCARlink
  ☆51Updated 8 months ago
• OSU-BMBL / scDEAL
  Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
  ☆54Updated 10 months ago
• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆35Updated 4 years ago
• alexyermanos / Platypus
  R package for the analysis of single-cell immune repertoires
  ☆42Updated 3 months ago
• icbi-lab / luca
  Single-cell Lung Cancer Atlas with 1.2M cells
  ☆63Updated 4 months ago
• Durenlab / LINGER
  ☆106Updated 3 weeks ago