lanagarmire / Asgard
☆40Updated last year
Alternatives and similar repositories for Asgard:
Users that are interested in Asgard are comparing it to the libraries listed below
- Gene group activity utility functions for Scanpy☆71Updated 2 months ago
- ☆61Updated 8 months ago
- ☆14Updated 11 months ago
- R implementation of GeneTrajectory☆56Updated 11 months ago
- ☆16Updated last year
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated last year
- Predict RNA velocity through deep learning☆66Updated last year
- A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…☆45Updated 7 months ago
- ☆44Updated 10 months ago
- R package for the analysis of single-cell immune repertoires☆42Updated last month
- Code repository for the Tumor Immune Cell Atlas (TICA) project☆62Updated 2 years ago
- Using TCR and expression for sequence embedding☆53Updated last month
- Single cell omics biology annotations☆50Updated last week
- ☆30Updated 2 years ago
- SciLifeLab SIB Summer School for Advanced topics in Single Cell Omics. Site: https://nbisweden.github.io/single-cell_sib_scilifelab_2021/☆23Updated 3 years ago
- Single-cell Lung Cancer Atlas with 1.2M cells☆60Updated 2 months ago
- ☆54Updated last year
- Code repository for single cell RNA-seq☆34Updated 4 years ago
- ☆94Updated 2 months ago
- Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis☆54Updated 10 months ago
- Spatial transcriptomics of heart tissue☆81Updated last year
- ☆30Updated 3 weeks ago
- RA Synovial Single-cell Multimodal Cell Atlas☆12Updated last year
- ☆28Updated 4 months ago
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆52Updated 7 months ago
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆21Updated 2 months ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆61Updated 10 months ago
- Analysis of cell-cell communication at single-cell resolution☆100Updated 6 months ago
- Senescent Cell Identification☆34Updated last year
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆43Updated last year