drewvoigt10 / cellcuratoRLinks
sharing interactive single cell gene expression visualizations from Seurat
☆10Updated 2 years ago
Alternatives and similar repositories for cellcuratoR
Users that are interested in cellcuratoR are comparing it to the libraries listed below
Sorting:
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 3 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 8 months ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆15Updated 3 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆38Updated 3 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆26Updated 3 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated 8 months ago
- ☆29Updated 2 years ago
- ☆13Updated 11 months ago
- ☆23Updated last month
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated last year
- This repository contains the CellTag data analysis R package to support clone calling and lineage reconstruction.☆21Updated 2 years ago
- ☆34Updated last year
- Flexible, probablistic metrics for quality control of scRNA-seq data☆20Updated 2 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- ☆18Updated 2 months ago
- ☆16Updated 6 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆40Updated 2 years ago
- ☆12Updated 5 years ago
- ☆18Updated last year
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆21Updated 11 months ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 2 months ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- ☆17Updated 2 years ago
- ☆13Updated 7 years ago
- Code repository for the snRNA-seq cross-tissue atlas project☆20Updated 3 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆30Updated 2 years ago
- ☆15Updated 3 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- Cluster Identity Predictor (R package implementation)☆20Updated 3 years ago