☆11Jul 8, 2024Updated 2 years ago
Alternatives and similar repositories for gsdensity
Users that are interested in gsdensity are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 该存储库,主要存放根据自己所掌握的NGS差异表达分析技术方法为主,具体的实验以及方案设计等将不会存放在此存储库。☆15May 19, 2020Updated 6 years ago
- ☆90Jun 29, 2024Updated 2 years ago
- FastReseg for detection and correction of cell segmentation error based on spatial profile of transcripts.☆16Apr 30, 2026Updated 4 months ago
- Seamless R and C++ integration for the sparse matrix dgCMatrix class☆12Jul 1, 2022Updated 4 years ago
- Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease☆17Mar 23, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆16Sep 29, 2023Updated 2 years ago
- ☆17Jul 13, 2024Updated 2 years ago
- Genearlized mapping scripts for RNA-seq and Patch-seq data☆19Sep 29, 2025Updated 11 months ago
- ☆13Nov 9, 2022Updated 3 years ago
- ☆19Sep 19, 2025Updated last year
- NicheDE is a method that detects context dependent changes in gene expression in spatial transcriptomic data.☆23Jun 10, 2025Updated last year
- ☆20Jan 23, 2026Updated 8 months ago
- Functions to analyze copy number aberrations in single-cell data☆13Feb 3, 2025Updated last year
- ☆20May 23, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- a computational framework to identify and characterize cell niches from spatial omics data at single-cell resolution☆56Aug 11, 2025Updated last year
- ☆18Oct 13, 2023Updated 2 years ago
- ☆25Jul 9, 2025Updated last year
- Code used to process the data of the HBCA project☆35Feb 9, 2024Updated 2 years ago
- Calculate cluster similarity between clusters from different single cell datasets/batches/samples.☆26Feb 2, 2026Updated 7 months ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆22Mar 25, 2026Updated 5 months ago
- scripts associated with NAFLD-NASH project☆31May 23, 2024Updated 2 years ago
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…☆91Dec 13, 2024Updated last year
- ☆25Sep 11, 2026Updated last week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆36Aug 3, 2026Updated last month
- PopSTR - A Population based microsatellite genotyper☆33Oct 23, 2023Updated 2 years ago
- A permutation-free framework for scalable, robust, and reference-based cell-cell communication analysis in single cell transcriptomics st…☆27May 23, 2026Updated 4 months ago
- Implementation of MaSigPro for scRNA-Seq Data☆20Jul 31, 2024Updated 2 years ago
- Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer☆82Dec 16, 2023Updated 2 years ago
- ☆18Sep 13, 2023Updated 3 years ago
- Tools for Adaptive Immune Receptor Sequence-Based Machine and Deep Learning☆15Aug 22, 2026Updated last month
- analysis script for GBM single cell RNA seq data☆22May 26, 2021Updated 5 years ago
- Single Cell Oriented Reconstruction of PANDA-based Individually Optimized Networks☆28Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…☆76Oct 16, 2025Updated 11 months ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆32Dec 3, 2024Updated last year
- A Python package for the identification, characterization and comparison of spatial clusters from spatial -omics data.☆197Aug 31, 2026Updated 3 weeks ago
- ☆28Apr 9, 2025Updated last year
- SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples☆75Dec 9, 2021Updated 4 years ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆100Nov 30, 2023Updated 2 years ago
- scAB detects multiresolution cell states with clinical significance☆23Nov 14, 2022Updated 3 years ago