☆18Jun 13, 2024Updated 2 years ago
Alternatives and similar repositories for MitoTrace
Users that are interested in MitoTrace are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tool for modelling of mitochondrial heteroplasmy☆21Jul 16, 2024Updated 2 years ago
- Accurate, deep, fast, and fully-automated scRNA-seq cell-type annotation☆15Jan 21, 2025Updated last year
- A guide to using the Python scRNA-seq analysis package Scanpy from R☆15Apr 27, 2020Updated 6 years ago
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆24Jan 16, 2024Updated 2 years ago
- A re-analysis of the [Single-cell transcriptomic analysis of Alzheimer’s disease](https://www.nature.com/articles/s41586-019-1195-2) usin…☆14Dec 5, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆15Nov 2, 2017Updated 8 years ago
- Repo for generating custom blacklist for reads originating from mitochondrial DNA to nuclear genome☆22Jun 10, 2022Updated 4 years ago
- ☆17Mar 11, 2023Updated 3 years ago
- ☆10Oct 22, 2018Updated 8 years ago
- SNV calling from single cell sequencing☆119Nov 11, 2024Updated last year
- Trajectory Inference Based on SNP information.☆24Jun 19, 2024Updated 2 years ago
- Functions for handling RNA-seq files and formats as input and output for scrattch functions.☆11Aug 20, 2025Updated last year
- popsicleR, a flexible R package aimed at providing most of the necessary quality controls and preliminary information for complete and de…☆25Dec 3, 2025Updated 10 months ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆33Jun 12, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Enhanced Chromatin Occupancy (EChO)☆13Jan 8, 2020Updated 6 years ago
- ☆34Jun 12, 2019Updated 7 years ago
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆78Feb 27, 2023Updated 3 years ago
- Ecotypes of Triple-Negative Breast Cancer in Response to Chemotherapy☆18Oct 12, 2026Updated 2 weeks ago
- Code from "Deep Learning Of The Regulatory Grammar Of Yeast 5′ Untranslated Regions From 500,000 Random Sequences"☆15Sep 26, 2017Updated 9 years ago
- Full-length transcriptome splicing and mutation analysis☆93Mar 23, 2026Updated 7 months ago
- scRNA-seq analysis beyond gene annotations using transcriptionally active regions (TARs) generated from sequence alignment data☆11Jul 25, 2022Updated 4 years ago
- ☆35Jun 7, 2019Updated 7 years ago
- mapping somatic variants to cell barcodes in scRNA-Seq data☆11Sep 21, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆10Sep 27, 2026Updated last month
- MTAE-based 5UTR design model☆12Jan 23, 2024Updated 2 years ago
- Single cell somatic genotyper☆10Sep 28, 2022Updated 4 years ago
- ☆12Apr 21, 2023Updated 3 years ago
- Metagenomics microbial abundance quantification☆28Sep 22, 2022Updated 4 years ago
- Constructing gene regulatory networks by integrating scRNA-seq and scATAC-seq data☆13Dec 7, 2021Updated 4 years ago
- a variational autoencoder method for clustering single-cell mutation data☆11Apr 17, 2024Updated 2 years ago
- ☆11Sep 22, 2026Updated last month
- Scripts for analyses and figures for SNP STR Imputation manuscript☆14Jul 24, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Gene Set Scoring on the Nearest Neighbor Graph (gssnng) for Single Cell RNA-seq (scRNA-seq) using AnnData h5ad files.☆13Oct 1, 2024Updated 2 years ago
- ☆17Mar 18, 2026Updated 7 months ago
- SClineager: a Bayesian hierarchical model that performs lineage tracing of single cells based on genetic markers☆11Apr 30, 2024Updated 2 years ago
- ☆10Nov 6, 2023Updated 2 years ago
- ☆11Sep 13, 2024Updated 2 years ago
- MicrOSAtellite Instability Classifier☆15Apr 27, 2026Updated 6 months ago
- Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease☆17Mar 23, 2024Updated 2 years ago