Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease
☆15Mar 23, 2024Updated 2 years ago
Alternatives and similar repositories for scDrugPrio
Users that are interested in scDrugPrio are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R tools for analysis and visualization of single-cell subclustering data☆19May 1, 2026Updated 3 weeks ago
- ☆11Jul 8, 2024Updated last year
- ☆14Jan 24, 2024Updated 2 years ago
- Code relating to http://dx.doi.org/10.2139/ssrn.4132721☆11Nov 24, 2022Updated 3 years ago
- Gene group activity utility functions for Scanpy☆105Dec 21, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- cell type deconvolution for multi-condition bulk RNA-seq data☆33Feb 28, 2022Updated 4 years ago
- scVI extension for unspliced RNA☆15May 18, 2025Updated last year
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆19Aug 29, 2023Updated 2 years ago
- Inference of RNA velocity modules for prediction of cell fates and integration with spatial and regulatory models.☆86Mar 20, 2025Updated last year
- ☆47Jan 11, 2024Updated 2 years ago
- An R package to convert SingeCellExperiment and Seurat objects into anndata as comprehensively as possible.☆12May 19, 2026Updated last week
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆39Aug 10, 2023Updated 2 years ago
- scTM: A package for topic modelling in transcriptomics data☆25May 1, 2024Updated 2 years ago
- ☆21Jul 7, 2025Updated 10 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Estimate microRNA activity in single cells☆13May 4, 2022Updated 4 years ago
- Profile purification of single-cell spatial transcriptomics data☆44May 18, 2026Updated last week
- ☆25Jan 9, 2024Updated 2 years ago
- Detection of PatIent-Level distances from single cell genomics and pathomics data with Optimal Transport (PILOT)☆26Apr 29, 2026Updated last month
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆28Sep 20, 2022Updated 3 years ago
- SIMBA: SIngle-cell eMBedding Along with features☆66Oct 16, 2024Updated last year
- ☆59Mar 23, 2026Updated 2 months ago
- Individual level Differential Expression Analysis for Single cells☆27Dec 24, 2022Updated 3 years ago
- Hotspot cluster distance analysis in spatial transcriptomic data☆37Feb 10, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- MTAE-based 5UTR design model☆10Jan 23, 2024Updated 2 years ago
- SIDISH: Semi-supervised Iterative Deep Learning for Identifying Single-cell High-risk Populations☆23Jan 23, 2026Updated 4 months ago
- Integration of gut cell atlases☆35May 6, 2026Updated 3 weeks ago
- Python implementation of Milo for differential abundance testing on KNN graph☆84Feb 17, 2025Updated last year
- R package☆27Aug 16, 2020Updated 5 years ago
- cEll tyPe enrIChment☆17Dec 11, 2022Updated 3 years ago
- cell type specific, trait-associated gene regulation☆30Mar 31, 2025Updated last year
- Post-verkko graph and assembly curation in Python.☆18Apr 28, 2026Updated last month
- Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets☆125Apr 16, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A single-cell analysis toolkit to jointly analyze samples from distinct conditions☆37Apr 2, 2025Updated last year
- Bayesian model for RNA velocity estimation of periodic manifolds☆35Jun 25, 2024Updated last year
- A Python implementation of the LEMUR algorithm for analyzing multi-condition single-cell RNA-seq data.☆28Jan 3, 2025Updated last year
- Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer☆83Dec 16, 2023Updated 2 years ago
- Visualizing Somatic Alterations of 10X Spatial Transcriptomics Data☆14Nov 7, 2024Updated last year
- ☆47Jan 28, 2026Updated 4 months ago
- ☆15May 6, 2024Updated 2 years ago