746443qjb / SCNTLinks
☆18Updated 3 months ago
Alternatives and similar repositories for SCNT
Users that are interested in SCNT are comparing it to the libraries listed below
Sorting:
- The integration of single cell rank-based gene set enrichment analysis☆134Updated 3 months ago
- A package for reference mapping and nice visualization☆22Updated last year
- ☆176Updated 5 months ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆113Updated last month
- R package to visualize gene expression data based on weighted kernel density estimation☆106Updated last year
- This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…☆84Updated last year
- An implement R package to visualize GSEA results☆189Updated last month
- Gene set scoring for single-cell data☆165Updated last week
- ☆108Updated 5 years ago
- Quantifying metabolism activity at the single-cell resolution☆140Updated 3 months ago
- Data processing and analysis related code associated with the study "A single-cell and spatially resolved atlas of human breast cancers".☆118Updated last year
- This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset☆150Updated 4 years ago
- ☆38Updated last year
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆79Updated 11 months ago
- CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.☆172Updated 6 months ago
- Multi-Omics integration and VIsualization in Cancer Subtyping☆145Updated 4 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆109Updated 5 months ago
- ☆115Updated last month
- Create stacked violin plot☆51Updated 3 years ago
- SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples☆71Updated 3 years ago
- A R package for advanced single cell data viz☆68Updated last month
- Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".☆126Updated last year
- Implementation of Seurat's SpatialFeaturePlot to allow blended expression☆11Updated 7 months ago
- Mollecular Functional Portraits☆43Updated last year
- Assessing the purity of single cell population☆136Updated 3 years ago
- Codes used in pan-T cell analysis☆63Updated 2 years ago
- scDIOR: Single cell data IO softwaRe☆148Updated 3 years ago
- R Package for Single-Cell Dataset Processing and Visualization☆64Updated 4 years ago
- Single-nuclei RNA-seq and ATAC-seq in Alzheimer's disease☆95Updated 4 years ago
- ☆62Updated 6 years ago