☆29Jun 25, 2025Updated last year
Alternatives and similar repositories for SCNT
Users that are interested in SCNT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- fastCNV R package to detect putative CNVs in single cell and spatial transcriptomics data☆51Jul 9, 2026Updated 2 weeks ago
- ☆11Mar 30, 2024Updated 2 years ago
- An R package for single-cell and spatial omics analysis, integration, interpretation, and visualization.☆289Updated this week
- Construct Tumor Transition Zone Microenvironment☆61Jun 25, 2025Updated last year
- ☆33Jun 15, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆102May 4, 2026Updated 2 months ago
- A method for calculating single cell entropy and reconstructing cell differentiation lineage using single-cell RNA-seq data☆10May 26, 2023Updated 3 years ago
- ☆12Oct 30, 2023Updated 2 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆55Jan 21, 2026Updated 6 months ago
- The codes and files for the study of subsolid nodules (SSN).☆15Oct 13, 2020Updated 5 years ago
- scDIOR: Single cell data IO softwaRe☆156Feb 15, 2022Updated 4 years ago
- ☆16Oct 18, 2023Updated 2 years ago
- Quantifying metabolism activity at the single-cell resolution☆191Feb 18, 2026Updated 5 months ago
- Identification of clone-specific and cancer-selective multi-targeting therapeutic options based on single-cell transcriptomic profiles of…☆25Feb 20, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆15Oct 24, 2025Updated 9 months ago
- Single cell analysis tools for expression from RNA-seq in R☆10Feb 3, 2016Updated 10 years ago
- ESICCC: A systematic computational framework for evaluation, selection and integration of cell-cell communication inference methods☆13Jan 10, 2024Updated 2 years ago
- ☆11Jun 25, 2024Updated 2 years ago
- Python Toolkit for Transcription Factor Activity Inference and Clustering of scRNA-seq Data☆37Dec 15, 2025Updated 7 months ago
- ☆21May 6, 2025Updated last year
- Methods for decontamination of single cell data☆65Feb 16, 2025Updated last year
- ☆20Oct 23, 2023Updated 2 years ago
- ☆20Apr 24, 2026Updated 3 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Fast spatial deconvolution via leverage-score sketching — scales to million-spot datasets while preserving rare cell type signals.☆23Jun 30, 2026Updated 3 weeks ago
- Querying cellular states and programs by learning representations of gene sets☆16Nov 2, 2025Updated 8 months ago
- Extracellular vesicle-derived miRNA-mediated cell-cell communication inference for single-cell transcriptomic data☆18Apr 15, 2025Updated last year
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆21May 13, 2026Updated 2 months ago
- EnrichMap: Spatially-informed enrichment analysis for functional interpretation of spatial transcriptomics.☆15Jun 26, 2026Updated 3 weeks ago
- ☆17Jun 17, 2021Updated 5 years ago
- Cell segmentation☆18Jul 6, 2026Updated 2 weeks ago
- FitDevo: accurate inference of single-cell developmental potential using sample-specific gene weight☆18Apr 7, 2024Updated 2 years ago
- The effect of metabolic traits on oral and oropharyngeal cancer risk: a Mendelian randomization analysis☆12Apr 19, 2023Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Spatially-aware quality control for spatial transcriptomics☆16Oct 22, 2025Updated 9 months ago
- Framework for analysis of cell-types and Ligand-Receptor cooccurrences☆21Feb 13, 2023Updated 3 years ago
- This is a web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on …☆15Sep 24, 2019Updated 6 years ago
- Guided construction of single cell reference☆16Jul 3, 2023Updated 3 years ago
- SCassist : An AI Based Workflow Assistant for Single-Cell Analysis☆33Aug 22, 2025Updated 11 months ago
- Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer☆18Nov 30, 2024Updated last year
- ☆389Jan 21, 2026Updated 6 months ago