☆24Aug 2, 2024Updated last year
Alternatives and similar repositories for asc_seurat
Users that are interested in asc_seurat are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Calibrated clustering via knockoffs for single-cell genomics☆11Feb 13, 2025Updated last year
- ☆34Jun 12, 2019Updated 6 years ago
- Accurate, deep, fast, and fully-automated scRNA-seq cell-type annotation☆15Jan 21, 2025Updated last year
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆83Jun 9, 2022Updated 3 years ago
- ☆22Sep 20, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Short idioms and patterns for transforming, merging and managing files and channels in Nextflow.☆17Jul 27, 2025Updated 9 months ago
- Toolkit for metacell analysis☆23Aug 8, 2024Updated last year
- Rheumatoid Arthritis project. single cell RNA sequencing data.☆15May 31, 2021Updated 4 years ago
- Spatial reconstruction of dissociated single-cell data☆19Jan 12, 2024Updated 2 years ago
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆14Jun 5, 2019Updated 6 years ago
- Easy single cell analysis platform for enrichment☆223Apr 3, 2026Updated last month
- Interactive software tool for the assignment of cell types in single-cell studies.☆34Apr 14, 2023Updated 3 years ago
- R package to infer multicellular programs from single-cell data using multi-omics factor analysis (MOFA)☆13Aug 17, 2023Updated 2 years ago
- Metagenomics microbial abundance quantification☆28Sep 22, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Alignability testing and integration of single-cell data☆22Feb 29, 2024Updated 2 years ago
- A package to help convert different single-cell data formats to each other☆465Feb 20, 2026Updated 2 months ago
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆22Updated this week
- Differential expression (DE); gene set Enrichment Analysis (GSEA); single cell RNAseq studies (scRNAseq)☆34Oct 6, 2022Updated 3 years ago
- OCR-Phenotype Association from Tissue-Aware Conservation Inference Toolkit☆18Dec 3, 2025Updated 5 months ago
- ☆21Jan 10, 2025Updated last year
- Trajectory Inference Based on SNP information.☆24Jun 19, 2024Updated last year
- Single cell interactive plotting tools☆24Jun 12, 2020Updated 5 years ago
- A re-analysis of the [Single-cell transcriptomic analysis of Alzheimer’s disease](https://www.nature.com/articles/s41586-019-1195-2) usin…☆14Dec 5, 2023Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆11Jun 29, 2021Updated 4 years ago
- ☆26Mar 30, 2026Updated last month
- a spatial deconvolution method based on deep learning frameworks, which converts bulk transcriptomes into spatially resolved single-cell …☆136Mar 22, 2023Updated 3 years ago
- VAPr: A Python package for NoSQL variant data storage, annotation and prioritization☆37Jun 30, 2021Updated 4 years ago
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆37Apr 5, 2022Updated 4 years ago
- Feature selection for preserving biological trajectories in single-cell data☆22May 29, 2025Updated 11 months ago
- 🧬 Unique (& conserved) DNA sequence identification☆18Mar 10, 2026Updated last month
- A scalable SCENIC workflow for single-cell gene regulatory network analysis☆175Dec 8, 2022Updated 3 years ago
- Compare different genome alignment tools using a wide range of genomes with different complexities.☆14Dec 3, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Demultiplexing and debarcoding tool designed for LR-Split-seq data.☆25Oct 19, 2023Updated 2 years ago
- A simple cli tool to explore xls files☆27Feb 4, 2020Updated 6 years ago
- CellO: Gene expression-based hierarchical cell type classification using the Cell Ontology☆68Jul 8, 2023Updated 2 years ago
- Please consider using/contributing to https://github.com/nf-core/scdownstream☆26Jun 13, 2024Updated last year
- Differential gene expression analysis and pathway analysis of RNAseq data☆32Jul 3, 2025Updated 10 months ago
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆58Jun 29, 2023Updated 2 years ago
- scMatch: a single-cell gene expression profile annotation tool using reference datasets☆26Jan 25, 2022Updated 4 years ago