person-c / easybioLinks
Comprehensive Single-Cell Annotation and Transcriptomic Analysis Toolkit
☆13Updated 3 months ago
Alternatives and similar repositories for easybio
Users that are interested in easybio are comparing it to the libraries listed below
Sorting:
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆38Updated 7 months ago
- An R package for visualising cell-cell interactions☆46Updated last year
- Human brain, >200,000 nuclei☆23Updated 4 years ago
- Single-cell analysis with non-negative matrix factorization☆45Updated 5 months ago
- An R package to calculate Dynamical Network Biomarkers (DNB).☆10Updated 3 years ago
- An R package to download and merge labeled single-cell RNA-seq data from the PanglaoDB database into a Seurat object.☆26Updated 2 years ago
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆32Updated last month
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆39Updated this week
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆39Updated 3 years ago
- An r package that works as a wrapper to homologene☆48Updated 2 years ago
- Supplementary information for "Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcript…☆10Updated 2 years ago
- A database of useful gene signatures for single-cell analysis☆28Updated 8 months ago
- A General Framework for Consensus Partitioning☆65Updated 11 months ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆40Updated 4 years ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆26Updated 5 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆21Updated 3 years ago
- R package containing the Cerebro application.☆40Updated 4 years ago
- Pseudotime Analysis for Bulk Data☆18Updated last year
- Calculating Tumor microenvironment score☆29Updated 3 years ago
- ☆18Updated 3 years ago
- scDataviz: single cell dataviz and downstream analyses☆66Updated 4 years ago
- ☆13Updated 8 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆21Updated 5 years ago
- 🧠 Visualizing Single Cell and Spatial Transcriptomics☆50Updated 2 months ago
- popsicleR, a flexible R package aimed at providing most of the necessary quality controls and preliminary information for complete and de…☆23Updated last month
- R package for Bioconductor submission☆38Updated 3 years ago
- ☆43Updated 5 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- Cancer Dependency Map package☆33Updated last year
- The source code of web server TIP, including example data.☆20Updated 6 years ago