Alternatives and similar repositories for easybio

Users that are interested in easybio are comparing it to the libraries listed below

• Sarah145 / CCPlotR
  An R package for visualising cell-cell interactions
  ☆43Updated last year
• YuLab-SMU / tigeR
  🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package
  ☆35Updated 6 months ago
• zdebruine / singlet
  Single-cell analysis with non-negative matrix factorization
  ☆45Updated 4 months ago
• showteeth / GEfetch2R
  GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools
  ☆39Updated 8 months ago
• dosorio / rPanglaoDB
  An R package to download and merge labeled single-cell RNA-seq data from the PanglaoDB database into a Seurat object.
  ☆26Updated 2 years ago
• junjunlab / bulkPseudotime
  Pseudotime Analysis for Bulk Data
  ☆18Updated last year
• dosorio / SCORPION
  Supplementary information for "Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcript…
  ☆10Updated last year
• pwwang / plotthis
  plotthis is an R package that is built upon ggplot2 and other plotting packages.
  ☆76Updated this week
• jgamache014 / snRNA-seq-workflow
  Human brain, >200,000 nuclei
  ☆24Updated 4 years ago
• NMikolajewicz / scMiko
  R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…
  ☆31Updated last week
• SCA-IRCM / SingleCellSignalR
  R package for Bioconductor submission
  ☆37Updated 3 years ago
• oganm / homologene
  An r package that works as a wrapper to homologene
  ☆47Updated 2 years ago
• carmonalab / SignatuR
  A database of useful gene signatures for single-cell analysis
  ☆27Updated 6 months ago
• dengchunyu / TIP
  The source code of web server TIP, including example data.
  ☆20Updated 6 years ago
• romanhaa / cerebroApp
  R package containing the Cerebro application.
  ☆40Updated 4 years ago
• miccec / yaGST
  ☆13Updated 8 years ago
• bicciatolab / popsicleR
  popsicleR, a flexible R package aimed at providing most of the necessary quality controls and preliminary information for complete and de…
  ☆24Updated this week
• TransBioInfoLab / TNBC_analysis
  Code to reproduce TNBC analysis and figures
  ☆25Updated 3 years ago
• wuaipinglab / scImmuCC
  Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.
  ☆10Updated last year
• YuLab-SMU / ggsc
  🧠 Visualizing Single Cell and Spatial Transcriptomics
  ☆50Updated last month
• jokergoo / cola
  A General Framework for Consensus Partitioning
  ☆63Updated 10 months ago
• RRHO2 / RRHO2
  ☆18Updated 3 years ago
• amsszlh / scMC
  R package for integrating and comparing multiple single cell genomic datasets
  ☆11Updated 4 years ago
• milescsmith / ReductionWrappers
  R wrappers to connect Python dimensional reduction tools and single cell data objects (Seurat, SingleCellExperiment, etc...)
  ☆36Updated 11 months ago
• wmacnair / SampleQC
  Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data
  ☆38Updated 3 years ago
• zdq0808 / TMEscore
  Calculating Tumor microenvironment score
  ☆29Updated 2 years ago
• YangJAT / HCA
  Hierarchical Cell Annotation
  ☆26Updated last year
• zdq0808 / Blasso
  Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers
  ☆20Updated 3 years ago
• kevinblighe / scDataviz
  scDataviz: single cell dataviz and downstream analyses
  ☆64Updated 4 years ago
• liuhong-jia / scAnno
  ☆25Updated 6 months ago