casanova-lab / NHCLinks
NHC: A computational approach to detect physiological homogeneity in the midst of genetic heterogeneity
☆10Updated last year
Alternatives and similar repositories for NHC
Users that are interested in NHC are comparing it to the libraries listed below
Sorting:
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆11Updated 5 years ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆18Updated last month
- Aggregation and analyses of rare CNVs across diseases☆14Updated 2 years ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Updated 6 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 10 months ago
- WES HLA Typing based on multiple alternative tools☆16Updated 4 years ago
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆12Updated last year
- Interactive eQTL visualizations☆13Updated 2 years ago
- GWAS and rare variants tests at high speed using regenie☆15Updated 5 months ago
- A collection of modules to process and analyze IMGT-HLA sequences.☆28Updated 2 years ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 5 years ago
- Machine learning use cases for teaching☆13Updated 7 years ago
- Comprehensive Human Expressed SequenceS☆17Updated 10 months ago
- ☆12Updated last year
- Mean Alterations Using Discrete Expression☆14Updated last year
- Filter and prioritize fusion calls☆20Updated 8 months ago
- Documentation for vcfR☆11Updated 3 weeks ago
- mitochondrial variant analysis tools☆14Updated 4 years ago
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆33Updated 3 months ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- Optimizing Cancer Mutation Signatures Jointly with Sampling Likelihood☆10Updated 2 years ago
- DriverPower☆26Updated 4 months ago
- GWAS genetics Fine-mapping method☆15Updated last year
- A flexible tool for the multi-resolution localization of causal variants across the genome, accounting for population structure.☆15Updated 2 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- CADD-SV – a framework to score the effect of structural variants☆14Updated 2 months ago
- R package for haplotype phasing using single-cell RNA-seq data☆13Updated 7 years ago
- ☆10Updated 2 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 2 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 3 months ago