nclark-lab / RERconvergeLinks
Analysis of convergence between organismal traits and DNA/protein sequences
☆55Updated 2 weeks ago
Alternatives and similar repositories for RERconverge
Users that are interested in RERconverge are comparing it to the libraries listed below
Sorting:
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆57Updated 2 years ago
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆81Updated 4 years ago
- This is the standalone version of the EviAnn pipeline☆100Updated this week
- NLR-Annotator upload☆68Updated last year
- ☆74Updated last week
- Molecular convergence detection☆39Updated last month
- PhyloAcc a software to detect the changes of conservation of a genomic region☆32Updated 3 months ago
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆72Updated 9 months ago
- TSEBRA: Transcript Selector for BRAKER☆47Updated 8 months ago
- paml documentation and tutorials☆60Updated last month
- Tutorial about R package PopGenome☆42Updated 6 years ago
- A list of software for pangenomics☆119Updated this week
- Synteny Imager☆63Updated 10 months ago
- RepeatIdentifier☆66Updated 3 months ago
- ☆44Updated 8 years ago
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆67Updated 4 years ago
- kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.☆39Updated last year
- Neural network classification of TE☆90Updated last month
- A comparative genomics workflow using Nextflow, conda, Julia and R☆45Updated last year
- Portable solution to generate genome alignment chains using lastz☆57Updated last month
- PacBio BAM toolkit☆43Updated 4 months ago
- Best practices and workflow for genome annotation☆77Updated 3 months ago
- ☆35Updated last year
- A shiny application to visualize MCscan result☆37Updated 2 years ago
- Mapping pipeline for data generated using Arima-HiC☆78Updated last year
- TransposonUltimate - a holistic set of tools for transposon identification☆84Updated 3 years ago
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆107Updated this week
- A program to call variants from genome alignment☆81Updated 2 months ago
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆36Updated 5 months ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆74Updated 4 years ago