nclark-lab / RERconverge
Analysis of convergence between organismal traits and DNA/protein sequences
☆46Updated 4 months ago
Related projects ⓘ
Alternatives and complementary repositories for RERconverge
- paml documentation and tutorials☆45Updated last year
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆49Updated last month
- Tutorial about R package PopGenome☆40Updated 5 years ago
- NLR-Annotator upload☆58Updated last year
- ☆24Updated last week
- Synteny Imager☆60Updated 2 months ago
- TSEBRA: Transcript Selector for BRAKER☆47Updated 5 months ago
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆77Updated 3 years ago
- ☆42Updated 7 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆50Updated last year
- A program to call variants from genome alignment☆76Updated 7 months ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆67Updated 3 years ago
- A new simple and efficient software to PCA and Cluster For popolation VCF File☆60Updated 6 months ago
- ☆69Updated last month
- Automated de novo assembly of whole chloroplast genomes.☆44Updated last month
- A shiny application to visualize MCscan result☆33Updated 2 years ago
- A pipeline that accepts a VCF file to run through Admixture☆56Updated 2 months ago
- Pipelines and tools for the processing of ancient and modern HTS data.☆43Updated 2 months ago
- High-precision TE Annotator☆58Updated this week
- A set of functions to visualise genotypes based on a VCF☆84Updated 2 years ago
- Molecular convergence detection☆29Updated 2 weeks ago
- Tutorials on phylogenetic and phylogenomic inference☆38Updated 5 months ago
- Tutorials on evolutionary genomics☆41Updated 2 years ago
- A tool for evaluate long-read de novo assembly results☆41Updated 2 months ago
- Tools for working with second gen assemblies, fasta sequences, etc☆92Updated 8 years ago
- Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data☆34Updated 6 months ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆54Updated 2 weeks ago
- Simple pileup-based variant caller☆81Updated 7 months ago
- Code used to analyse WGS data of giraffe in Coimbra et al. 2021☆10Updated last year
- Identification of errors in draft genome assemblies with single-base pair resolution for quality assessment and improvement☆55Updated last month