cma2015 / G2PLinks
G2P is an integrated genomic selection (GS) package for predicting phenotypes from genotypes. It includes 15 GS algorithms and 13 evaluation measurements.
☆13Updated 7 years ago
Alternatives and similar repositories for G2P
Users that are interested in G2P are comparing it to the libraries listed below
Sorting:
- ☆25Updated 4 years ago
- Perform GWAS with gemma in a simple pipeline☆26Updated 2 months ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- Genetic maps in autopolyploids☆29Updated last month
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆38Updated 3 months ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Genome-Phenome Wide Association Study☆15Updated 2 years ago
- Tutorial on using popular tools for learning about population history☆51Updated 6 years ago
- Data Simulation for Life Science and Breeding☆37Updated last month
- A haplotype analysis toolkit for natural variation study.☆30Updated last year
- Genome-wide de novo genotyping with 2bRAD☆23Updated last month
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆60Updated 8 months ago
- Influence of algorithms, parameter choice, and feature selection on genomic prediction accuracy☆11Updated 7 years ago
- Tutorials for bioinformatics and data analysis related to landscape genomics☆29Updated 6 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆25Updated 5 years ago
- Code and binaries related to processing haplotagging data☆15Updated 3 years ago
- Whole-genome bioinformatic pipeline for pooled or individual-based NGS data using bash and R☆21Updated 3 years ago
- Scripts and resources for the haploblocks manuscript☆16Updated 5 years ago
- kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.☆39Updated last year
- Flexible Genotyping of Polyploids using Next Generation Sequencing Data☆29Updated 8 months ago
- Infer demographic history with the Moran model☆47Updated last month
- Utilities for analyzing next generation sequencing data☆17Updated 6 years ago
- ARG-based inference of selection using deep learning☆18Updated last year
- repository for code used in analysis of open wild wheat consortium☆16Updated 3 years ago
- LDna: an R package to perform linkage disequilibrium network analysis☆31Updated last year
- info and docs for the Wright Lab☆14Updated 9 years ago
- Bulked-Segregant Analysis using vcf file with or without parents☆28Updated 6 months ago
- ☆43Updated last year
- R functions for generating site frequency spectra (SFS) from a VCF file.☆28Updated 5 years ago
- Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"☆17Updated 4 years ago