G2P is an integrated genomic selection (GS) package for predicting phenotypes from genotypes. It includes 15 GS algorithms and 13 evaluation measurements.
☆17Sep 27, 2017Updated 8 years ago
Alternatives and similar repositories for G2P
Users that are interested in G2P are comparing it to the libraries listed below
Sorting:
- lme4 for Genomic Selection☆18Jan 26, 2026Updated last month
- Bayesian Multi-Trait Multi-Environment for genomic selection[R package] [Dev version]☆19Aug 6, 2023Updated 2 years ago
- ☆28Nov 22, 2020Updated 5 years ago
- two-stage analysis of multi-environment trials for genomic selection and GWAS☆29Mar 7, 2026Updated 2 weeks ago
- 2024 BreedWheat Genomic Selection pipeline☆14Jan 3, 2024Updated 2 years ago
- ☆19Sep 20, 2020Updated 5 years ago
- Lectures, documents and presentations☆15Updated this week
- DeepGS is a R package for predicting phenotypes from genotypes using deep learning techniques.☆56Dec 3, 2021Updated 4 years ago
- ☆27Jul 28, 2025Updated 7 months ago
- A pipeline to use Lep-Map3 to create linkage maps and LepAnchor for anchoring and orienting genome assemblies with said linkage maps.☆15Jun 24, 2025Updated 8 months ago
- Influence of algorithms, parameter choice, and feature selection on genomic prediction accuracy☆12Apr 2, 2018Updated 7 years ago
- This is a read-only mirror of the CRAN R package repository. rrBLUP — Ridge Regression and Other Kernels for Genomic Selection. Homepag…☆14Dec 11, 2023Updated 2 years ago
- An R package to compute relationship matrices for diploid and autotetraploid species☆22Dec 12, 2025Updated 3 months ago
- Plant breeding simulations with AlphaSimR☆27Jan 5, 2025Updated last year
- ☆13Oct 15, 2024Updated last year
- Tools for phenotyping, simulating and modelling with the SUNFLO crop model☆10Apr 17, 2025Updated 11 months ago
- Draw genetic map (linkage map) in R☆13Nov 12, 2017Updated 8 years ago
- Whole Exome/Whole Genome Sequencing alignment pipeline☆30Sep 18, 2024Updated last year
- Python language bindings for bwa☆12Mar 2, 2026Updated 2 weeks ago
- ☆16Mar 11, 2026Updated last week
- Genome-Phenome Wide Association Study☆15Feb 7, 2023Updated 3 years ago
- ☆114Oct 3, 2025Updated 5 months ago
- MODAS: Multi-Omics Data Association Study toolkit☆21Nov 21, 2024Updated last year
- A python tool to evaluate genomic prediction in complex scenarios☆37Oct 18, 2022Updated 3 years ago
- ☆12Oct 13, 2023Updated 2 years ago
- Code for "Using machine learning to combine genetic and environmental data for maize grain yield predictions across multi-environment tri…☆19Jul 23, 2024Updated last year
- Course notes and scripts from ASReml-R short course taught by Salvador Gezan at the USDA-ARS station in Miami, FL☆13Jun 22, 2016Updated 9 years ago
- ☆18Oct 5, 2023Updated 2 years ago
- TrGP aims to get knowledge from the source task's learning system to improve the target genomic prediction (GP) task.☆15Dec 12, 2023Updated 2 years ago
- An R package for Poisson multivariate adaptive shrinkage.☆11Apr 15, 2024Updated last year
- Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies☆57Sep 6, 2025Updated 6 months ago
- GeneMark-ETP: gene finding in eukaryotic genomes supported by transcriptome sequencing and protein homology☆28Apr 11, 2025Updated 11 months ago
- https://filippob.github.io/introduction_to_gwas/☆22Jul 2, 2025Updated 8 months ago
- Yield Prediction Using Deep Learning on Multivariate Time Series Data☆18May 22, 2021Updated 4 years ago
- An open-source software for designing print-ready plot labels affixed with QR codes☆19Feb 11, 2026Updated last month
- [IJCAI 2024] An Embarrassingly Simple Approach to Enhance Transformer Performance in Genomic Selection for Crop Breeding☆18Dec 12, 2024Updated last year
- 生物信息学python代码，专注于重测序文本计算、处理☆30May 29, 2025Updated 9 months ago
- An open-source GUI for reconstructing plant 3D architecture from laser scans.☆29Updated this week
- Glittery data analysis and multi-variate analysis for all kinds of beautiful, big and small data sets. But remember - rubbish in = rubbis…☆24Sep 22, 2020Updated 5 years ago