cma2015 / G2PLinks
G2P is an integrated genomic selection (GS) package for predicting phenotypes from genotypes. It includes 15 GS algorithms and 13 evaluation measurements.
☆14Updated 8 years ago
Alternatives and similar repositories for G2P
Users that are interested in G2P are comparing it to the libraries listed below
Sorting:
- Genome-Phenome Wide Association Study☆15Updated 2 years ago
- Perform GWAS with gemma in a simple pipeline☆27Updated 6 months ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 6 years ago
- A haplotype analysis toolkit for natural variation study.☆30Updated 2 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆38Updated 7 months ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Build haplotye and generate figures☆18Updated 2 weeks ago
- GWAS software that can handle autopolyploids☆30Updated last month
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Updated 6 years ago
- ☆22Updated 6 years ago
- Genetic maps in autopolyploids☆31Updated 5 months ago
- Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies☆54Updated 2 months ago
- Main scripts and commands used to analyze goat population genetic and domestication☆19Updated 6 years ago
- Bulked-Segregant Analysis using vcf file with or without parents☆31Updated 11 months ago
- QTL mapping with binmap data☆18Updated 6 years ago
- A pipeline to use Lep-Map3 to create linkage maps and LepAnchor for anchoring and orienting genome assemblies with said linkage maps.☆14Updated 4 months ago
- Flexible Genotyping of Polyploids using Next Generation Sequencing Data☆30Updated last month
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆68Updated 3 weeks ago
- ☆42Updated last year
- Tutorial on using popular tools for learning about population history☆52Updated 7 years ago
- Scripts and resources for the haploblocks manuscript☆17Updated 5 years ago
- Infer demographic history with the Moran model☆49Updated 5 months ago
- hot_scan is a free software to detect genomic regions unusually rich (hotspot) in a given pattern via scan statistics☆10Updated 12 years ago
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- Assessing confidence in introgression among four populations☆27Updated 4 years ago
- ☆26Updated 4 years ago
- Methods for examining PCA locally along the genome.☆86Updated last year
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 6 years ago
- Genome-wide de novo genotyping with 2bRAD☆23Updated 5 months ago
- Scripts of population genomics analysis☆36Updated 7 years ago