schatzlab / Col-CEN
Resources for the Col-CEN reference genome assemblies
☆11Updated 2 years ago
Alternatives and similar repositories for Col-CEN:
Users that are interested in Col-CEN are comparing it to the libraries listed below
- Plant genome assembly and annotation pipeline using snakemake☆35Updated last year
- ☆36Updated last year
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆28Updated this week
- ☆22Updated 2 years ago
- HiCAT new project☆27Updated last year
- A genome assembly assessment pipeline.☆37Updated last year
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆13Updated 4 years ago
- Toolkit for evolutionary analyses of linkage groups☆26Updated 6 months ago
- ☆13Updated last year
- ☆27Updated 4 months ago
- A box of genomics tools☆21Updated 4 years ago
- ☆35Updated 10 months ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- ☆21Updated 10 months ago
- Likelihood-based Selective Sweep Detection☆37Updated last year
- ☆28Updated 2 weeks ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆25Updated 3 years ago
- ☆28Updated 8 months ago
- Centromics: visualing centromeres with multiple omics data☆22Updated 2 months ago
- ☆15Updated 2 years ago
- ☆24Updated 3 years ago
- Dynamic Elongation of a Genome Assembly Path☆20Updated 8 months ago
- ☆20Updated 5 months ago
- R package to draw syntenic plots in 3 different styles☆39Updated last year
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆16Updated last year
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆26Updated 3 years ago
- Yet another Hi-C scaffolding tool☆18Updated 2 months ago
- ☆17Updated 2 years ago
- Reconstruction of ancestral genome maps☆16Updated 6 years ago
- ☆42Updated 8 months ago