asl / BandageNG
a Bioinformatics Application for Navigating De novo Assembly Graphs Easily
☆115Updated last week
Related projects ⓘ
Alternatives and complementary repositories for BandageNG
- A genome completeness evaluation tool based on miniprot☆177Updated last month
- ☆119Updated last month
- ☆150Updated last month
- Pipeline to convert a haploid assembly into diploid☆90Updated 5 months ago
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆127Updated this week
- A tool for Racon polishing of miniasm assemblies☆73Updated 3 years ago
- Automated long-read first bacterial genome assembly tool implemented in Snakemake using Snaketool.☆106Updated 2 weeks ago
- Pangenome-based genome inference☆111Updated this week
- Foreign Contamination Screening caller scripts and documentation☆106Updated 4 months ago
- Research release basecalling models and configurations☆103Updated 4 months ago
- Analysis components from Oxford Nanopore Research☆93Updated 2 months ago
- A tool for somatic structural variant calling using long reads☆102Updated this week
- a signal-level demultiplexer for Oxford Nanopore reads☆124Updated 3 years ago
- Wally: Visualization of aligned sequencing reads and contigs☆108Updated last month
- Constructing a pangenome gene graph☆174Updated 3 months ago
- ☆109Updated this week
- Metagenomic classification of long-read sequencing data☆58Updated this week
- Tandem repeat genotyping and visualization from PacBio HiFi data☆105Updated last month
- A tool to identify, orient, trim and rescue full length cDNA reads☆80Updated 2 years ago
- Nanopore data assembler☆135Updated 2 years ago
- A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulatio…☆91Updated this week
- Find, circularise and annotate mitogenome from PacBio assemblies☆169Updated 3 months ago
- accurate LiftOver tool for new genome assemblies☆110Updated 3 months ago
- Earl Grey: A fully automated TE curation and annotation pipeline☆138Updated last week
- RaGOO is no longer supported. Please use RagTag instead: https://github.com/malonge/RagTag☆171Updated 3 years ago
- Pairwise SNP distance matrix from a FASTA sequence alignment☆127Updated 8 months ago
- Splitting of sequence reads by internal adapter sequence search☆51Updated last year
- Read Until client library for Nanopore Sequencing☆103Updated last month
- Yet another k-mer analyzer☆115Updated 7 months ago
- Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, et…☆83Updated 2 weeks ago