mdust from DFCI Gene Indices Software Tools (archived for a historical record only)
☆11Jan 2, 2015Updated 11 years ago
Alternatives and similar repositories for mdust
Users that are interested in mdust are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MITE Tracker: An accurate approach to identify miniature inverted-repeat transposable elements in large genomes☆20Mar 21, 2024Updated 2 years ago
- ☆18Jun 21, 2022Updated 3 years ago
- A parallel wrapper for LTR_FINDER☆55Mar 8, 2026Updated 2 weeks ago
- Resources for the Col-CEN reference genome assemblies☆11Feb 15, 2022Updated 4 years ago
- LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.☆51Jan 16, 2024Updated 2 years ago
- ☆12Dec 12, 2014Updated 11 years ago
- ☆40Jun 19, 2023Updated 2 years ago
- Bioinformatics scripts for genome analysis☆17Oct 26, 2022Updated 3 years ago
- Jitterbug is a bioinformatic software that predicts insertion sites of transposable elements in a sample sequenced by short paired-end re…☆17Jan 23, 2017Updated 9 years ago
- ☆13Sep 20, 2024Updated last year
- ParaFly - parallel cmd processing utility☆15Aug 10, 2021Updated 4 years ago
- Neural network classification of TE☆97Oct 9, 2025Updated 5 months ago
- Pipeline detecting distant and putative novel insertion sequences in prokaryotic genomes☆13Jun 10, 2021Updated 4 years ago
- Profile HMM-based hybrid error correction algorithm for long reads☆21Aug 15, 2018Updated 7 years ago
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Apr 18, 2019Updated 6 years ago
- Integrated toolkit for analysis and evaluation of annotated genomes☆25Aug 1, 2025Updated 7 months ago
- Tandem Repeats Finder: a program to analyze DNA sequences☆202Jan 16, 2023Updated 3 years ago
- finshingTool☆54Nov 22, 2016Updated 9 years ago
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆22Jul 31, 2017Updated 8 years ago
- ☆30Mar 4, 2022Updated 4 years ago
- Causal Variant Evidence Mapping with Non-parametric resampling☆12Dec 16, 2020Updated 5 years ago
- Documentation for Evolview☆29Nov 27, 2021Updated 4 years ago
- Bring Your Own Bioinformatics☆27Apr 28, 2016Updated 9 years ago
- parallelized blat with multi-threads support☆56Jan 23, 2025Updated last year
- Dynamic time warping of Oxford Nanopore squiggle data to characterize tandem repeats.☆32Jul 2, 2020Updated 5 years ago
- ☆13Mar 12, 2020Updated 6 years ago
- 🚝RAILS and 👞🔨Cobbler: Assembly Improvement by Long Sequence Scaffolding/Gap-filling☆27Mar 10, 2026Updated last week
- TD2☆34Jan 14, 2026Updated 2 months ago
- ☆13Apr 18, 2022Updated 3 years ago
- Hybrid Error Correction of Long Reads using Iterative Learning☆10Sep 27, 2018Updated 7 years ago
- ☆10Mar 11, 2026Updated last week
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆47Feb 23, 2021Updated 5 years ago
- TEFLoN uses paired-end illumina sequence data to discover and genotype transposable elements present in your samples.☆13Mar 5, 2021Updated 5 years ago
- BESST - scaffolder for genomic assemblies☆58Jul 6, 2023Updated 2 years ago
- Scripts for analyses and figures for SNP STR Imputation manuscript☆14Jul 24, 2018Updated 7 years ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Sep 24, 2015Updated 10 years ago
- Noise-Cancelling Repeat Finder☆27Apr 11, 2023Updated 2 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆39Mar 14, 2023Updated 3 years ago
- Multi-Omic Strategies for TWAS☆13Mar 27, 2023Updated 2 years ago