R Port of psmc
☆17Mar 16, 2023Updated 3 years ago
Alternatives and similar repositories for psmcr
Users that are interested in psmcr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tools for F1 hybrid PSMC (hPSMC) divergence time inference from whole genomes☆15May 29, 2024Updated 2 years ago
- (Greetings_here_is_yet_another) Rate of Adaptive Protein Evolution Software☆10Jul 19, 2024Updated last year
- Population genetic summary statistics☆40Sep 28, 2023Updated 2 years ago
- ARCHIVED Access sequences from the 1000 Plant Initiative (1KP)☆13Nov 7, 2025Updated 7 months ago
- an R package for admixture analyses☆19May 15, 2015Updated 11 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆19Sep 19, 2020Updated 5 years ago
- ☆21Jan 11, 2024Updated 2 years ago
- cobraa (coalescent based reconstruction of ancient admixture): a hidden Markov model to infer ghost admixture using just a diploid sequen…☆23Jun 17, 2025Updated last year
- Sampling and inference of genealogies with recombination☆57Apr 10, 2026Updated 2 months ago
- GitHub repository for GenErode, a Snakemake workflow for the analysis of whole-genome sequencing data from historical and modern samples …☆32May 18, 2026Updated last month
- Population Genetics Hackathon, to be held at NESCent on March 16-20, 2015☆18Jul 13, 2015Updated 10 years ago
- diveRsity: A comprehensive, general purpose population genetics analysis package.☆27Mar 8, 2026Updated 3 months ago
- Naive PCA for genotype data☆10Jul 27, 2016Updated 9 years ago
- ☆11Apr 20, 2018Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Population and Evolutionary Genetics Analysis System☆29Apr 4, 2026Updated 3 months ago
- Parallel Genomic evaluations in R☆18Sep 26, 2024Updated last year
- Scripts in R for Landscape Genomics Analyses v.2☆10Feb 17, 2023Updated 3 years ago
- Population genetic simulations in R☆64Jun 26, 2026Updated last week
- Implementation of the Pairwise Sequentially Markovian Coalescent (PSMC) model☆193Nov 17, 2025Updated 7 months ago
- ☆13May 13, 2024Updated 2 years ago
- An R interface for the ADMIXTOOLS software☆37Nov 24, 2025Updated 7 months ago
- mapDamage: tracking and quantifying damage patterns in ancient DNA sequences☆51Jul 14, 2025Updated 11 months ago
- ☆24Jun 9, 2017Updated 9 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13May 1, 2019Updated 7 years ago
- Module for analysing admixture graphs☆29Apr 30, 2018Updated 8 years ago
- A reimplementation of a classical PSMC method in python for educational purposes☆17Jul 22, 2024Updated last year
- Main scripts and commands used to analyze goat population genetic and domestication☆19Mar 25, 2019Updated 7 years ago
- Resources for the Col-CEN reference genome assemblies☆11Feb 15, 2022Updated 4 years ago
- Primer design from single genes to whole gene families for unlocking the tree of life☆16May 14, 2026Updated last month
- Rust bindings for the tskit library☆18Updated this week
- vembrane filters, sorts, and transforms VCF records using python expressions☆70Jun 23, 2026Updated 2 weeks ago
- ☆13Aug 18, 2023Updated 2 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆12Nov 23, 2020Updated 5 years ago
- ☆13Jan 29, 2025Updated last year
- Heuristic, parsimony-based ancestral recombination graph inference☆17Aug 25, 2021Updated 4 years ago
- Minimal Assumption Genomic Inference of Coalescence☆14Aug 8, 2023Updated 2 years ago
- Various bioinformatics tools☆20Oct 29, 2024Updated last year
- Compare different genome alignment tools using a wide range of genomes with different complexities.☆14Dec 3, 2022Updated 3 years ago
- A tool for estimating time-dependent migration rates based on cross-/within-population coalescent rates from MSMC☆16Apr 6, 2025Updated last year