Alternatives and similar repositories for PCAviz

Users that are interested in PCAviz are comparing it to the libraries listed below

• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆36Updated last year
• weissmanlab / magic
  Minimal Assumption Genomic Inference of Coalescence
  ☆14Updated 2 years ago
• vsbuffalo / msr
  Process MS results in R, in a tidy way
  ☆16Updated 7 years ago
• bodkan / admixr
  An R package for reproducible and automated ADMIXTOOLS analyses
  ☆33Updated 7 months ago
• StoreyLab / popkin
  R package to estimate kinship and FST from SNP data
  ☆21Updated 11 months ago
• thierrygosselin / radiator
  RADseq Data Exploration, Manipulation and Visualization using R
  ☆59Updated 2 weeks ago
• stephenslab / effective-computing
  Effective Computing—Resources for Computational Biologists
  ☆26Updated 5 years ago
• mailund / admixture_graph
  Module for analysing admixture graphs
  ☆28Updated 7 years ago
• liamrevell / learnPopGen
  initial commit
  ☆26Updated 2 years ago
• bcm-uga / pcadapt
  Performing highly efficient genome scans for local adaptation with R package pcadapt v4
  ☆42Updated last month
• hemstrow / snpR
  ☆30Updated this week
• timbeissinger / Maize-Teo-Scripts
  ☆17Updated 9 years ago
• sa-lee / starmie
  starmie: plotting and inference for population structure models
  ☆14Updated 6 years ago
• EricArcher / strataG
  strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.
  ☆26Updated last month
• danlwarren / RWTY
  R We There Yet?
  ☆31Updated 5 months ago
• AgResearch / KGD
  Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment
  ☆21Updated last month
• popsim-consortium / analysis
  Analysis of inference methods on standard population models
  ☆25Updated 3 years ago
• ngs-docs / 2015-nov-adv-rna
  ☆18Updated 9 years ago
• chrchang / eigensoft
  Experimental EIGENSOFT performance improvements.
  ☆21Updated 10 years ago
• martinsikora / admixr
  an R package for admixture analyses
  ☆17Updated 10 years ago
• j-a-thia / genomalicious
  A smorgasbord of R functions for performing and teaching population genomic analyses
  ☆19Updated last week
• NovembreLab / eems-around-the-world
  Repo to analyze population genetic data with many different methods
  ☆15Updated 5 years ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆71Updated last week
• pblischak / polyploid-genotyping
  SNP genotyping in polyploids
  ☆17Updated 5 years ago
• LynchLab / MAPGD
  A program for the Maximum-likelihood analysis of population genomic data.
  ☆29Updated 4 years ago
• kkeenan02 / diveRsity
  diveRsity: A comprehensive, general purpose population genetics analysis package.
  ☆26Updated 7 years ago
• gjuggler / ggphylo
  Phylogenetic plots for R and ggplot
  ☆27Updated 12 years ago
• statgenlmu / coala
  A Framework for Coalescent Simulation in R
  ☆23Updated last year
• YTLogos / ttplot
  Tao Yan's Plot Toolkit
  ☆12Updated 6 years ago
• ANGSD / NgsRelate
  ☆44Updated 6 months ago