sanger-pathogens / ArtemisLinks
Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation
☆255Updated last year
Alternatives and similar repositories for Artemis
Users that are interested in Artemis are comparing it to the libraries listed below
Sorting:
- Fast taxonomic classification of metagenomic sequencing reads using a protein reference database☆289Updated 4 months ago
- A tool to circularize genome assemblies☆247Updated last year
- Bacterial ribosomal RNA predictor☆255Updated 2 years ago
- AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and p…☆325Updated last week
- A user-friendly workflow for phylogenomics☆219Updated last month
- Rapid large-scale prokaryote pan genome analysis☆354Updated 3 years ago
- HyPhy: Hypothesis testing using Phylogenies☆240Updated this week
- ☆346Updated 6 months ago
- SortMeRNA: next-generation sequence filtering and alignment tool☆276Updated last month
- Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on h…☆384Updated this week
- Classifier for metagenomic sequences☆266Updated 3 months ago
- ATLAS - Three commands to start analyzing your metagenome data☆399Updated last week
- 🌈 Interactive analysis of metagenomics data☆423Updated last month
- Genome annotation with AUGUSTUS☆317Updated last month
- Assemble large genomes using short reads☆322Updated 5 months ago
- Fast genome analysis from unassembled short reads☆297Updated last year
- NCBI Prokaryotic Genome Annotation Pipeline☆354Updated 2 weeks ago
- [THIS REPO IS DEPRECATED] see newer repos: https://github.com/broadinstitute/viral-core https://github.com/broadinstitute/viral-assemble …☆195Updated last year
- breseq is a computational pipeline for finding mutations relative to a reference sequence using high-throughput DNA resequencing data. It…☆168Updated 2 months ago
- Eukaryotic Genome Annotation Pipeline☆361Updated 2 months ago
- A complete pipeline for metagenomic analysis☆428Updated 2 weeks ago
- 🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results☆239Updated last year
- A tool for generating consensus long-read assemblies for bacterial genomes☆332Updated last week
- Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks☆186Updated 3 weeks ago
- Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes☆294Updated this week
- Build a partitioned pangenome graph from microbial genomes☆280Updated this week
- Finds SNP sites from a multi-FASTA alignment file☆266Updated 4 years ago
- Rapid comparison and dereplication of genomes☆310Updated 3 months ago
- FASTA/FASTQ pre-processing programs☆190Updated 3 years ago
- Scans genome contigs against the ResFinder, PlasmidFinder, and PointFinder databases.☆166Updated 9 months ago