sandhya212 / BISCUIT_SingleCell_IMM_ICML_2016Links
R Codebase for BISCUIT: Infinite Mixture Model to cluster and impute single cells.
☆66Updated 7 years ago
Alternatives and similar repositories for BISCUIT_SingleCell_IMM_ICML_2016
Users that are interested in BISCUIT_SingleCell_IMM_ICML_2016 are comparing it to the libraries listed below
Sorting:
- Human transcription factor target genes from 6 databases in convenient R format.☆86Updated 7 years ago
- An R-based interface for loom files☆67Updated 5 years ago
- Multi-sample Unified Discriminant ANalysis☆75Updated 2 years ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆46Updated 9 years ago
- ☆38Updated 9 years ago
- consistent quantification of external RNA-seq data sets☆58Updated 2 years ago
- Normalize CITEseq Data☆67Updated 3 months ago
- A tool for unsupervised projection of single cell RNA-seq data☆96Updated 5 years ago
- ☆69Updated 7 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆44Updated 5 years ago
- Soon to be deprecated in favor of broadinstitute/warp github repo. Previously: Secondary analysis pipelines☆47Updated 10 months ago
- ☆55Updated 11 months ago
- supporting code for the multinomial single cell RNA-Seq paper☆53Updated 5 years ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆55Updated 4 years ago
- ☆59Updated 5 years ago
- BASiCS: Bayesian Analysis of Single-Cell Sequencing Data. This is an unstable experimental version. Please see http://bioconductor.org/pa…☆86Updated 4 months ago
- Clone of the Bioconductor repository for the scran package.☆46Updated last year
- Pipeline for initial analysis of droplet-based single-cell RNA-seq data☆95Updated 3 years ago
- An archived version of the scater repository, see https://github.com/davismcc/scater for the active version.☆64Updated 8 years ago
- ☆56Updated 5 years ago
- Mouse cell atlas☆61Updated 5 years ago
- scLVM is a modelling framework for single-cell RNA-seq data that can be used to dissect the observed heterogeneity into different sources…☆110Updated 3 years ago
- R package for robust clustering of single cell RNA sequencing data☆39Updated 2 years ago
- A set of tools supporting the development, execution, and benchmarking of trajectory inference methods. 🌍☆77Updated 4 years ago
- Lightweight Iterative Gene set Enrichment in R☆58Updated last year
- Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data☆108Updated 2 years ago
- ☆59Updated last year
- Normalization for single cell RNA-seq data☆51Updated 7 months ago
- An R interface to enrichR☆94Updated last year
- Pipelines for the analysis of 10x single-cell RNA-sequencing data☆57Updated 2 years ago