Japrin / sscClustLinks
simpler single cell RNAseq data clustering
☆40Updated 3 months ago
Alternatives and similar repositories for sscClust
Users that are interested in sscClust are comparing it to the libraries listed below
Sorting:
- ☆61Updated 5 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated last month
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- Functions for single cell data analysis☆32Updated 4 years ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆104Updated last month
- mutation(barcode) caller for 10x single cell data☆45Updated 4 years ago
- This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources…☆71Updated 6 years ago
- Publication Page for Satpathy*, Granja* et al 2019☆94Updated 5 years ago
- R package for robust clustering of single cell RNA sequencing data☆39Updated last year
- Code repository for single cell RNA-seq☆35Updated 4 years ago
- Single cell RNA analysis about paper “Caloric restriction reprograms the single-cell transcriptional landscape of Rattus norvegicus aging…☆29Updated 5 years ago
- ☆62Updated 4 years ago
- SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples☆69Updated 3 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆36Updated last year
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆81Updated last year
- R-code used for single-cell RNA-Seq analysis of kidney data.☆17Updated 5 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆96Updated 4 years ago
- scRNA-seq cell type identification☆43Updated 5 years ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆77Updated 2 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆65Updated 7 months ago
- Mouse cell atlas☆59Updated 5 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆45Updated last year
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆33Updated 4 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆68Updated 5 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆37Updated 4 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. Please download the R package from the RaceID3…☆15Updated 6 years ago
- scGSVA: Perform GSVA for single cell RNA seq☆60Updated 6 months ago
- A R package for advanced single cell data viz☆67Updated last year
- Codes used in pan-T cell analysis☆59Updated 2 years ago