Alternatives and similar repositories for Bioc2017BigDataWorkshopSession

Users that are interested in Bioc2017BigDataWorkshopSession are comparing it to the libraries listed below

• seandavi / wdlRunR
  Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources
  ☆34Updated 3 years ago
• waldronlab / curatedTCGAData
  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
  ☆44Updated last month
• omicsCore / SEQprocess
  SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package
  ☆17Updated 5 years ago
• fperraudeau / bioc2017singlecell
  Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…
  ☆11Updated 7 years ago
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆25Updated 2 years ago
• mikelove / alpine
  Modeling and correcting fragment sequence bias for RNA-seq
  ☆24Updated last year
• brentp / 450k-analysis-guide
  A Practical (And Opinionated) Guide To Analyzing 450K Data
  ☆35Updated 10 years ago
• zhanxw / seqminer
  Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R
  ☆30Updated 8 months ago
• thelovelab / tximeta
  Transcript quantification import with automatic metadata detection
  ☆68Updated 3 weeks ago
• nellore / runs
  Scripts for reproducing analyses of large RNA-seq datasets
  ☆15Updated 6 years ago
• statOmics / zingeR
  zero-inflated negative binomial gene expression in R
  ☆20Updated 7 years ago
• friend1ws / pmsignature
  R package for extracting mutation signatures from a list of somatic mutations
  ☆37Updated 5 years ago
• Shians / Glimma
  Glimma R package
  ☆50Updated 9 months ago
• mikelove / asthma
  RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)
  ☆19Updated 7 years ago
• federicomarini / ideal
  Interactive Differential Expression AnaLysis - DE made accessible and reproducible
  ☆29Updated last month
• jokergoo / gtrellis
  Genomic plot in trellis layout
  ☆40Updated last year
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆37Updated last month
• gladkia / igvR
  An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser
  ☆45Updated 6 months ago
• nignatiadis / IHW
  Independent Hypothesis Weighting
  ☆15Updated last year
• SnakeChunks / SnakeChunks
  Modular blocks to build Snakemake workflows for reproducible NGS analyses
  ☆22Updated 5 years ago
• pfh / topconfects
  TOP results by CONfident efFECT Sizes.
  ☆14Updated 5 months ago
• csoneson / countsimQC
  countsimQC - Compare characteristic features of count data sets
  ☆27Updated last month
• G3viz / g3viz
  Lollipop-diagram to interactively visualize genetic mutations
  ☆31Updated 8 months ago
• leekgroup / recount
  R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
  ☆41Updated 5 months ago
• macarthur-lab / exac_2015
  Companion repo for ExAC paper, 2015
  ☆33Updated 8 years ago
• kundajelab / training_camp
  Genetics training camp
  ☆21Updated 4 years ago
• kauralasoo / wiggleplotr
  A small R package to make sequencing read coverage plots in R.
  ☆38Updated 2 years ago
• carpentries-incubator / bioc-project
  Introduction to the Bioconductor project
  ☆18Updated 3 weeks ago
• caleblareau / immune_cell_signature_genes
  Repository for signature genes from Immune Cell Atlas
  ☆18Updated 5 years ago
• cBioPortal / cgdsr
  R-Based API for accessing the MSKCC Cancer Genomics Data Server (CGDS)
  ☆24Updated 4 years ago