seandavi / Bioc2017BigDataWorkshopSessionLinks
Tutorial for working with cloud infrastructure and AWS from R
☆20Updated 8 years ago
Alternatives and similar repositories for Bioc2017BigDataWorkshopSession
Users that are interested in Bioc2017BigDataWorkshopSession are comparing it to the libraries listed below
Sorting:
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 4 years ago
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Updated 8 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 11 years ago
- Glimma R package☆50Updated last year
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 6 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 8 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated last year
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆32Updated 4 months ago
- Examples of kallisto + sleuth☆11Updated 8 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- Genomic plot in trellis layout☆42Updated last week
- Transcript quantification import with automatic metadata detection☆67Updated last week
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 6 years ago
- DESeq2 or edgeR☆22Updated 9 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆31Updated 2 months ago
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆25Updated 2 years ago
- Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches☆44Updated last year
- A small R package to make sequencing read coverage plots in R.☆40Updated last month
- zero-inflated negative binomial gene expression in R☆20Updated 8 years ago
- Machine learning use cases for teaching☆13Updated 8 years ago
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆21Updated 8 months ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 7 years ago
- R Interface to the NCBI SRA metadata☆23Updated 7 years ago
- TOP results by CONfident efFECT Sizes.☆15Updated last year
- [DEPRECATED] Docker containers for Bioconductor☆49Updated 2 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- RNA-Seq Snakemake example with Jekyll homepage creation☆20Updated 11 years ago