srp33 / ShinyLearnerLinks
ShinyLearner: a software framework for performing benchmarks of machine-learning classification algorithms
☆18Updated 3 years ago
Alternatives and similar repositories for ShinyLearner
Users that are interested in ShinyLearner are comparing it to the libraries listed below
Sorting:
- R package for the identification of cancer-associated mutated genes using gene expression and mutation data.☆10Updated 3 years ago
- Bayesian modelling of DNA methylation heterogeneity at single-cell resolution☆23Updated last year
- R package for plotting 3D graphical visualization of multi-omics data.☆22Updated 3 years ago
- Topics In Data Science and Bioinformatics☆78Updated last year
- A GUI tool for easy and smooth visualisation and analysis of Spatial Transcriptomics datasets☆14Updated 4 years ago
- Moana: Robust cell type classification of single-cell RNA-Seq data☆24Updated 6 years ago
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆39Updated 3 years ago
- R package for differential discovery analyses in high-dimensional cytometry data☆20Updated 5 months ago
- Multi-omics studies are available here☆51Updated 3 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated 11 months ago
- Download, integration and visualizations of the variety & volume of TCGA data.☆51Updated 2 years ago
- Modelling DNA methylation profiles☆23Updated 5 years ago
- Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave☆44Updated last year
- Supplement to the report in https://greenelab.github.io/czi-hca-report/☆9Updated 6 years ago
- Analysis notebooks for the Covid-19 meta analysis that accompanies the Nature Medicine publication "Single-cell meta-analysis of SARS-CoV…☆25Updated 4 years ago
- TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages☆45Updated 2 years ago
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Updated 6 years ago
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆67Updated last year
- Creating multi-resolution embeddings and clusters from high dimensional data☆54Updated 9 months ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆26Updated 2 years ago
- Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets☆105Updated last year
- ☆22Updated 5 years ago
- tests for statistical significance of clustering☆38Updated 6 years ago
- A public list of computational methods for cell type inference from genome-scale DNA methylation data☆13Updated 6 years ago
- A Bioconductor package to retrieve and analyze data from the Human Protein Atlas☆36Updated last month
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆23Updated 4 years ago
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated 2 weeks ago
- Bioconductor package for management of multi-assay data☆72Updated 2 months ago
- Statistical power studies for multi-omics experiments.☆32Updated 5 months ago