srp33 / ShinyLearnerLinks
ShinyLearner: a software framework for performing benchmarks of machine-learning classification algorithms
☆18Updated 3 years ago
Alternatives and similar repositories for ShinyLearner
Users that are interested in ShinyLearner are comparing it to the libraries listed below
Sorting:
- R package for the identification of cancer-associated mutated genes using gene expression and mutation data.☆11Updated 3 years ago
- R package for plotting 3D graphical visualization of multi-omics data.☆23Updated 3 years ago
- A public list of computational methods for cell type inference from genome-scale DNA methylation data☆13Updated 6 years ago
- Modelling DNA methylation profiles☆23Updated 5 years ago
- Bayesian modelling of DNA methylation heterogeneity at single-cell resolution☆23Updated last year
- Topics In Data Science and Bioinformatics☆79Updated last year
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆40Updated 4 years ago
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Updated 2 weeks ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year
- A GUI tool for easy and smooth visualisation and analysis of Spatial Transcriptomics datasets☆15Updated 4 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆43Updated 3 months ago
- Download, integration and visualizations of the variety & volume of TCGA data.☆51Updated 3 years ago
- Statistical power studies for multi-omics experiments.☆32Updated 9 months ago
- Analysis notebooks for the Covid-19 meta analysis that accompanies the Nature Medicine publication "Single-cell meta-analysis of SARS-CoV…☆25Updated 4 years ago
- Bioconductor package for management of multi-assay data☆72Updated 2 months ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆13Updated 6 years ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated 3 months ago
- ☆12Updated last year
- TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages☆49Updated 2 years ago
- Genetics training camp☆21Updated 5 years ago
- Toolbox package for organizing and working with TCGA data☆28Updated 3 months ago
- Moana: Robust cell type classification of single-cell RNA-Seq data☆24Updated 6 years ago
- mantis-ml: Stochastic semi-supervised learning to prioritise genes from high throughput genomic screens☆30Updated last year
- A utility to map bisulfite sequencing data to the Illumina 450K methylation CpG set☆18Updated 9 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆39Updated 3 years ago
- Single sample network reconstruction in R☆23Updated 5 years ago
- Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave☆45Updated last year
- Main codes for AD epigenetics paper by Nativio et al.☆11Updated 5 years ago
- Comparison of dimensionality reduction methods☆30Updated 5 years ago
- Multi-omics studies are available here☆52Updated 3 years ago