tseemann / any2fastaLinks
Convert various sequence formats to FASTA
☆136Updated 2 years ago
Alternatives and similar repositories for any2fasta
Users that are interested in any2fasta are comparing it to the libraries listed below
Sorting:
- BSR-Based Allele Calling Algorithm☆148Updated 3 weeks ago
- A user-friendly workflow for phylogenomics☆214Updated last week
- snipit: summarise snps relative to your reference sequence☆163Updated 2 months ago
- Pairwise SNP distance matrix from a FASTA sequence alignment☆137Updated last year
- GET_HOMOLOGUES: a versatile software package for pan-genome analysis☆116Updated 3 weeks ago
- "Reads to report" for public health and clinical microbiology☆141Updated last year
- A robust, extensible metagenomics pipeline☆171Updated last week
- Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets☆202Updated 10 months ago
- Bacterial ribosomal RNA predictor☆247Updated last year
- Benchmarking of long-read assembly tools for bacterial whole genomes☆171Updated 4 years ago
- ⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads☆230Updated 2 years ago
- ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes☆115Updated last year
- Pan-genome wide association studies☆197Updated last year
- Metatranscriptomics Tutorial☆63Updated 2 years ago
- FunGAP: fungal Genome Annotation Pipeline☆111Updated last month
- Quality control for MinION sequencing data☆217Updated 2 years ago
- ultrafast taxonomic profiling and genome querying for metagenomic samples by abundance-corrected minhash.☆233Updated last week
- Analyze changes in gene family size and provide a statistical foundation for evolutionary inferences.☆116Updated 4 years ago
- Processing pipeline for pan-genome visulization and exploration☆139Updated last year
- Assembly and intrahost/low-frequency variant calling for viral samples☆138Updated last week
- Making whole bacterial genome sequencing data analysis easy☆108Updated 2 months ago
- Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data☆115Updated last year
- Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data☆155Updated last week
- Download files from NCBI Entrez by accession☆126Updated 10 months ago
- The ARTIC field bioinformatics pipeline☆125Updated last month
- ☆212Updated 5 months ago
- A tool for generating consensus long-read assemblies for bacterial genomes☆325Updated last year
- Simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data☆160Updated 2 years ago
- ☆200Updated 2 months ago
- Parsnp was designed to align the core genome of hundreds to thousands of bacterial genomes within a few minutes to few hours. Input can b…☆145Updated 2 months ago