tseemann / any2fastaLinks
Convert various sequence formats to FASTA
☆138Updated 3 years ago
Alternatives and similar repositories for any2fasta
Users that are interested in any2fasta are comparing it to the libraries listed below
Sorting:
- BSR-Based Allele Calling Algorithm☆149Updated 3 weeks ago
- snipit: summarise snps relative to your reference sequence☆164Updated 3 months ago
- A user-friendly workflow for phylogenomics☆219Updated 3 weeks ago
- FunGAP: fungal Genome Annotation Pipeline☆111Updated 2 months ago
- Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets☆204Updated last year
- Pairwise SNP distance matrix from a FASTA sequence alignment☆140Updated last year
- GET_HOMOLOGUES: a versatile software package for pan-genome analysis☆118Updated 2 months ago
- Pan-genome wide association studies☆202Updated last year
- ultrafast taxonomic profiling and genome querying for metagenomic samples by abundance-corrected minhash.☆244Updated last month
- breseq is a computational pipeline for finding mutations relative to a reference sequence using high-throughput DNA resequencing data. It…☆167Updated last month
- Metatranscriptomics Tutorial☆63Updated 2 years ago
- Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data☆117Updated 2 years ago
- "Reads to report" for public health and clinical microbiology☆141Updated last year
- ☆143Updated last year
- Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins☆200Updated last week
- Processing pipeline for pan-genome visulization and exploration☆141Updated last year
- Analyze changes in gene family size and provide a statistical foundation for evolutionary inferences.☆117Updated 4 years ago
- A robust, extensible metagenomics pipeline☆174Updated last week
- ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes☆115Updated last year
- Benchmarking of long-read assembly tools for bacterial whole genomes☆173Updated 4 years ago
- Nextflow pipeline to analyze PacBio HiFi full-length 16S data☆82Updated last month
- MitoZ: A toolkit for assembly, annotation, and visualization of animal mitochondrial genomes☆127Updated 9 months ago
- A tool for generating consensus long-read assemblies for bacterial genomes☆331Updated last year
- Get assembly statistics from FASTA and FASTQ files☆122Updated 2 years ago
- Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data☆161Updated last week
- ⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads☆233Updated 2 years ago
- ☆216Updated 7 months ago
- Development version of Easyfig☆100Updated last year
- HGTector2: Genome-wide prediction of horizontal gene transfer based on distribution of sequence homology patterns.☆136Updated last year
- A tool to circularize genome assemblies☆247Updated last year