groupschoof / AHRDLinks
High throughput protein function annotation with Human Readable Description (HRDs) and Gene Ontology (GO) Terms.
☆67Updated 2 years ago
Alternatives and similar repositories for AHRD
Users that are interested in AHRD are comparing it to the libraries listed below
Sorting:
- ☆35Updated 2 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- A fork of exonerate: a generic tool for sequence alignment☆70Updated last year
- My collection of light bioinformatics analysis pipelines for specific tasks☆76Updated last year
- Automatically exported from code.google.com/p/prottest3☆38Updated 7 years ago
- Synteny Imager☆64Updated 2 months ago
- A range of different perl scripts for manipulating sequences, conducting alignments, consensus sequences, changing formats☆30Updated 2 years ago
- Tools for detecting DNA modifications from single molecule, real-time sequencing data☆26Updated 3 years ago
- NLR annotation tool☆33Updated last year
- Scripting analyses of genomes in Ensembl Plants☆40Updated 3 weeks ago
- PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics☆36Updated 2 years ago
- k-mer learning materials☆80Updated 7 months ago
- PHAST☆75Updated this week
- Best practices and workflow for genome annotation☆78Updated 5 months ago
- convert various features into a GFF-like file for use in genome browsers☆72Updated 3 months ago
- Error correction for Illumina RNA-seq reads☆67Updated last year
- SynVisio is an interactive multiscale visualization tool that lets you explore the results of McScanX a popular synteny and collinearity …☆89Updated last year
- Visualize whole genome alignments as linear maps☆73Updated 2 months ago
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- PhyloAcc a software to detect the changes of conservation of a genomic region☆33Updated 5 months ago
- orthology assignment using phylogenetic and network analyses☆47Updated 7 months ago
- A program for detection of tRNA genes☆69Updated 2 years ago
- LRSDAY: Long-read Sequencing Data Analysis for Yeasts☆32Updated last year
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 9 years ago
- genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.☆52Updated 10 months ago
- web documentation for Trinotate☆48Updated 2 years ago
- hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.☆69Updated last week
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆76Updated 9 years ago
- Conditional Reciprocal Best Blast☆42Updated 8 years ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago