nathanweeks / exonerateLinks
A fork of exonerate: a generic tool for sequence alignment
☆71Updated 2 years ago
Alternatives and similar repositories for exonerate
Users that are interested in exonerate are comparing it to the libraries listed below
Sorting:
- Same species annotation lift over pipeline.☆98Updated 2 years ago
- Python programs for processing GFF3 files☆102Updated 3 weeks ago
- Protein hint generation pipeline for gene finding in eukaryotic genomes☆60Updated 2 years ago
- Synteny Imager☆65Updated 3 weeks ago
- Wally: Visualization of aligned sequencing reads and contigs☆120Updated 3 months ago
- Genome mapping and spliced alignment of cDNA or amino acid sequences☆109Updated 7 months ago
- Assembly statistic visualisation☆92Updated 2 years ago
- k-mer learning materials☆82Updated 10 months ago
- A Circos-based tool to visualize genome assembly consistency or synteny between assemblies.☆88Updated last year
- PHAST☆78Updated this week
- This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye…☆58Updated 4 years ago
- Automatically exported from code.google.com/p/prottest3☆38Updated 7 years ago
- A post sequencing QC tool for Oxford Nanopore sequencers☆105Updated 3 weeks ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆59Updated 2 years ago
- High throughput protein function annotation with Human Readable Description (HRDs) and Gene Ontology (GO) Terms.☆67Updated 2 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- Scripts and programs for the Holt Lab's MinION desktop☆32Updated 5 years ago
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 9 years ago
- ☆45Updated 9 years ago
- A local-haplotagging-based small and structural variant caller☆90Updated 3 weeks ago
- ☆35Updated 2 years ago
- Splitting of sequence reads by internal adapter sequence search☆51Updated 2 years ago
- GenMap - Fast and Exact Computation of Genome Mappability☆113Updated last year
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆77Updated 9 years ago
- source code for EVM☆120Updated last year
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆118Updated last month
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆109Updated 3 years ago
- A list of software for pangenomics☆165Updated this week
- Make colorful identity heatmaps of genomic sequence☆128Updated last year
- Show pangenome graphs in an easy way☆57Updated 5 months ago