nathanweeks / exonerateLinks
A fork of exonerate: a generic tool for sequence alignment
☆67Updated last year
Alternatives and similar repositories for exonerate
Users that are interested in exonerate are comparing it to the libraries listed below
Sorting:
- Same species annotation lift over pipeline.☆98Updated last year
- Automatically exported from code.google.com/p/prottest3☆37Updated 7 years ago
- Synteny Imager☆63Updated 10 months ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- A Circos-based tool to visualize genome assembly consistency or synteny between assemblies.☆80Updated 7 months ago
- Dotplot large Genomes in an Interactive, Efficient and Simple way☆104Updated last week
- Genome mapping and spliced alignment of cDNA or amino acid sequences☆105Updated last month
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 8 years ago
- Wally: Visualization of aligned sequencing reads and contigs☆118Updated 3 months ago
- PHAST☆73Updated 3 weeks ago
- A local-haplotagging-based small and structural variant caller☆78Updated 2 months ago
- A post sequencing QC tool for Oxford Nanopore sequencers☆98Updated 3 months ago
- Assembly statistic visualisation☆90Updated last year
- My collection of light bioinformatics analysis pipelines for specific tasks☆75Updated last year
- ☆63Updated last week
- ONT assembly and Illumina polishing pipeline☆89Updated 4 years ago
- A list of software for pangenomics☆119Updated this week
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆107Updated this week
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆57Updated 2 years ago
- ☆35Updated 2 years ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago
- Python programs for processing GFF3 files☆98Updated last year
- Protein hint generation pipeline for gene finding in eukaryotic genomes☆58Updated last year
- Variant calling tool for long-read sequencing data☆110Updated 3 months ago
- PacBio hybrid error correction through iterative short read consensus☆61Updated 6 years ago
- Scripts and programs for the Holt Lab's MinION desktop☆32Updated 4 years ago
- A collection of scripts for processing fastq files in ways to improve de novo transcriptome assemblies, and for evaluating those assembli…☆50Updated last year
- Software for clustering de novo assembled transcripts and counting overlapping reads☆72Updated 3 years ago
- 🔗Genome assembly scaffolder using minimizer graphs☆84Updated 9 months ago
- Conditional Reciprocal Best Blast☆41Updated 8 years ago