Linear trajectory inference for single-cell RNA-seq
β63Nov 26, 2025Updated 6 months ago
Alternatives and similar repositories for SCORPIUS
Users that are interested in SCORPIUS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Visualising single-cell trajectories, including comparisons between two models πβ32Dec 9, 2021Updated 4 years ago
- Overview of the scripts used to analyse the brainimmuneatlas dataβ19Oct 20, 2020Updated 5 years ago
- Tutorial for the analysis of scRNA-seq data in Rβ18Aug 28, 2018Updated 7 years ago
- Signature Analysis and Visualization for Single-Cell RNA-seqβ181Jun 10, 2024Updated last year
- Updated scripts and pipelines for processing GESTALT data at single-cell resolutionβ20May 22, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Inferring, interpreting and visualising trajectories using a streamlined set of packages π¦β186Jun 24, 2021Updated 4 years ago
- Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial informationβ23Sep 30, 2022Updated 3 years ago
- Descriptive probabilistic marker gene approach to single-cell pseudotime inferenceβ31Nov 29, 2019Updated 6 years ago
- β15Jun 3, 2019Updated 7 years ago
- Differential expression (DE); gene set Enrichment Analysis (GSEA); single cell RNAseq studies (scRNAseq)β34Oct 6, 2022Updated 3 years ago
- β28Feb 6, 2019Updated 7 years ago
- COMUNET: a tool to explore and visualize intercellular communicationβ12Apr 15, 2020Updated 6 years ago
- Functions for identifying and characterizing continuous developmental trajectories in single-cell data.β338Apr 23, 2024Updated 2 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. This is a novel R package of the RaceID3 and Sβ¦β44Nov 25, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient β’ AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Algorithms for single-cell analysisβ29Jul 19, 2021Updated 4 years ago
- An R-based interface for loom filesβ68Jul 9, 2020Updated 5 years ago
- R package for single-cell RNA-sequencing analysisβ16Sep 30, 2025Updated 8 months ago
- Acquiring images from allen brain atlas, mouse ISH experiments in R.