elimereu / matchSCore2Links
☆56Updated 5 years ago
Alternatives and similar repositories for matchSCore2
Users that are interested in matchSCore2 are comparing it to the libraries listed below
Sorting:
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 5 years ago
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆76Updated 2 years ago
- Normalize CITEseq Data☆67Updated 2 months ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆55Updated 4 years ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆58Updated 4 years ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆86Updated 2 months ago
- R package for robust clustering of single cell RNA sequencing data☆39Updated 2 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- scRNA-seq cell type identification☆44Updated 6 years ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆39Updated 3 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆41Updated 4 years ago
- An R-based interface for loom files☆67Updated 5 years ago
- mutation(barcode) caller for 10x single cell data☆44Updated 5 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆45Updated 3 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆47Updated 2 years ago
- ☆29Updated 2 years ago
- scWGCNA☆61Updated 3 years ago
- ☆43Updated 5 years ago
- scDataviz: single cell dataviz and downstream analyses☆66Updated 4 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- Data and analysis scripts for our Embryo Timecourse paper.☆68Updated 6 years ago
- An R toolkit for estimation of cell composition from bulk expression data☆81Updated 7 months ago
- Clone of the Bioconductor repository for the scran package.☆46Updated last year
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆53Updated 2 years ago
- Clone of the Bioconductor repository for the DropletUtils package.☆63Updated 5 months ago
- A tool for unsupervised projection of single cell RNA-seq data☆96Updated 5 years ago
- Cell type pipes for R☆52Updated 2 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆53Updated 5 years ago
- COMET Single-Cell Marker Detection tool☆32Updated 3 years ago