Neural-Systems-at-UIO / nutilLinks
https://nutil.readthedocs.io/en/latest/
☆13Updated 2 months ago
Alternatives and similar repositories for nutil
Users that are interested in nutil are comparing it to the libraries listed below
Sorting:
- motion correction☆17Updated 2 years ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆46Updated 2 weeks ago
- Activity Quantification and Analysis for molecular spatiotemporal signals☆33Updated last month
- Brainways☆22Updated 4 months ago
- Calcium Data Extraction and Analysis☆49Updated 3 years ago
- Code published with the paper J. Mölter, L. Avitan, and G. J. Goodhill. "Detecting neural assemblies in calcium imaging data". BMC Biolog…☆12Updated 6 years ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆56Updated last month
- Tools for working with single-neuron morphological reconstructions☆22Updated last year
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Mesoscale activity ephys ingest schema☆11Updated 2 years ago
- Analysis package for miniscope data☆14Updated 3 years ago
- Fast, volumetric cell detection. In development.☆21Updated last week
- ☆13Updated 2 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- ☆18Updated 3 years ago
- ☆52Updated last year
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- Region Of Interest Classification and Tracking☆27Updated last week
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆30Updated 2 years ago
- Analysis code for Easy Electrophysiology (www.easyelectrophysiology.com)☆17Updated 10 months ago
- ☆17Updated 2 years ago
- Histology processing☆72Updated last month
- spike extraction from calcium signals (Deneux et al., 2016)☆34Updated 5 years ago
- Serial-section automated anatomy extension for ScanImage☆17Updated last week
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 5 years ago
- ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing☆24Updated 3 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 2 weeks ago
- A curated list of awesome Janelia software☆17Updated 10 months ago
- A package to analyse calcium imaging data recorded with the Miniscope.☆33Updated 3 years ago