Neural-Systems-at-UIO / nutilLinks
https://nutil.readthedocs.io/en/latest/
☆13Updated 2 months ago
Alternatives and similar repositories for nutil
Users that are interested in nutil are comparing it to the libraries listed below
Sorting:
- Activity Quantification and Analysis for molecular spatiotemporal signals☆34Updated last month
- motion correction☆17Updated 3 years ago
- Tools for working with single-neuron morphological reconstructions☆22Updated last year
- Brainways☆22Updated 5 months ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆47Updated last week
- ☆18Updated 4 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- Interactive Python course for using the Neurodata Without Borders format☆15Updated 6 years ago
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆31Updated 2 years ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 5 years ago
- Fast, volumetric cell detection. In development.☆22Updated last week
- Flow-Registration toolbox for 2P motion compensation☆27Updated 4 months ago
- ☆17Updated 2 years ago
- Mesoscale activity ephys ingest schema☆11Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- spike extraction from calcium signals (Deneux et al., 2016)☆34Updated 5 years ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆56Updated last week
- Match suite2p ROIs between imaging sessions☆28Updated 6 years ago
- Code published with the paper J. Mölter, L. Avitan, and G. J. Goodhill. "Detecting neural assemblies in calcium imaging data". BMC Biolog…☆12Updated 6 years ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- Implementation of "Precise Mapping of Single Neurons by Calibrated 3D Reconstruction of Brain Slices Reveals Topographic Projection in Mo…☆16Updated 3 years ago
- ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing☆24Updated 3 years ago
- Calcium Data Extraction and Analysis☆49Updated 3 years ago
- Region Of Interest Classification and Tracking☆27Updated last week
- ☆41Updated 4 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆41Updated last month
- Revealing neural correlates of behavior without behavioral measurements☆16Updated 6 years ago
- Histology processing☆72Updated last month
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated 2 months ago
- A curated list of awesome Janelia software☆17Updated 11 months ago