fiji / HDF5_Vibez
HDF5 plugin for ImageJ and Fiji.
☆11Updated 4 months ago
Alternatives and similar repositories for HDF5_Vibez:
Users that are interested in HDF5_Vibez are comparing it to the libraries listed below
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 7 months ago
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆62Updated this week
- ImageJ convenience layer for N5☆16Updated this week
- A 3D interactivity toolbox for napari☆33Updated 3 months ago
- PSFj - Know your microscope fluorescence☆21Updated 5 years ago
- Use ImageJ functionality from napari☆27Updated this week
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Updated 3 years ago
- ☆20Updated last month
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆63Updated 2 weeks ago
- Python bindings for MMCore, Micro-Manager's device control layer☆34Updated this week
- Online documentation and reference for CLIJ☆28Updated 3 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆39Updated 4 months ago
- GPU accelerated 3D image deconvolution using CUDA☆35Updated 8 months ago
- ☆22Updated 3 years ago
- Control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated last month
- A set of Qt-based widgets onto the pymmcore-plus model☆15Updated 2 weeks ago
- Image acquisition software for mesoSPIM light-sheet microscopes.☆41Updated this week
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆25Updated 2 weeks ago
- ☆29Updated last year
- ☆22Updated 5 months ago
- ☆16Updated 2 years ago
- A napari plugin for zarr backed OME-NGFF images☆32Updated this week
- Import Trackmate XML files in Python as Pandas dataframe☆9Updated 3 weeks ago
- A hub to start the next generation of Microscope Control Software☆55Updated 4 years ago
- Place to discuss the future design of a universal microscope hardware interface☆15Updated 3 years ago
- python tools for BigDataViewer☆22Updated 2 months ago
- Fusing image tiles with dask array's map_blocks☆30Updated last year
- Linking napari layers with Matplotlib plots☆40Updated this week
- Various parts made for fluorescence microscopy + optics work☆16Updated 5 years ago
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Updated 9 months ago