python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.
☆15Jan 24, 2017Updated 9 years ago
Alternatives and similar repositories for PyClearVolume
Users that are interested in PyClearVolume are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…☆18Mar 30, 2026Updated last week
- Fiji macro for cutting confocal stacks at various depths relative to surface signal☆10Sep 28, 2020Updated 5 years ago
- ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. …☆46Feb 18, 2025Updated last year
- GUI to compute and explore receptive fields, primarily from calcium imaging recordings☆13Jun 26, 2021Updated 4 years ago
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆19Nov 18, 2025Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Nov 26, 2020Updated 5 years ago
- Keras network for spike detection from calcium traces☆12Jul 7, 2020Updated 5 years ago
- Example analyses making extensive use of nelpy.☆10May 1, 2019Updated 6 years ago
- Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python☆221Dec 1, 2025Updated 4 months ago
- High-throughput Detection of Neurons for Brain-wide analysis with Deep Learning☆18Feb 21, 2022Updated 4 years ago
- Image registration (alignment) software for large microscopy images☆27Oct 15, 2023Updated 2 years ago
- TensorFlow-based classifier for microscope image focus quality.☆18Jun 14, 2022Updated 3 years ago
- AutoTx - an intelligent background file transfer service for Windows.☆28Mar 25, 2026Updated 2 weeks ago
- Match suite2p ROIs between imaging sessions☆28Apr 12, 2019Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Blind deconvolution module in python☆20Jun 22, 2012Updated 13 years ago
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Mar 2, 2019Updated 7 years ago
- Fast, volumetric cell detection. In development.☆24Mar 30, 2026Updated last week
- Easily read and write ome-tiff images in python☆28May 6, 2024Updated last year
- Helpers to use BigDataViewer as a quick visualization tool in other projects.☆26Jun 13, 2024Updated last year
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆26Jun 3, 2022Updated 3 years ago
- czi reader from https://www.lfd.uci.edu/~gohlke/code/czifile.py.html☆15Oct 15, 2025Updated 5 months ago
- Fiji module for image transformation and related algorithms