juremaj / track2pLinks
Cell tracking for longitudinal calcium imaging recordings.
☆14Updated 2 months ago
Alternatives and similar repositories for track2p
Users that are interested in track2p are comparing it to the libraries listed below
Sorting:
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆108Updated this week
- ☆52Updated last year
- a visualization method for neural data☆241Updated 10 months ago
- ☆27Updated this week
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated last week
- NEural MOdelS, a statistical modeling framework for neuroscience.☆120Updated last week
- A gui for browsing joint calcium imaging + behavioral data.☆55Updated last year
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆83Updated last year
- PYthon Neural Analysis Package☆354Updated this week
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆80Updated 9 months ago
- Search Strategy analysis and more for spatial navigation data in rodents☆32Updated this week
- Browser-based NWB visualization and DANDI exploration☆62Updated last week
- pynapple collaborative data analysis (high level python scripts)☆38Updated 2 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆158Updated 3 weeks ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆75Updated this week
- Visualization of electrophysiological data from Elephant☆24Updated last year
- A package to manage electrophysiology analysis.☆22Updated last week
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆70Updated last week
- Registration of cells across sessions.☆76Updated last year
- Collection of tools to handle Neuropixel 1.0 and 2.0 data☆19Updated last week
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆141Updated this week
- Code for recreating the figures in the brainrender paper (Claudi et al. 2020)☆12Updated 5 years ago
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- Match suite2p ROIs between imaging sessions☆28Updated 6 years ago
- This repository contains code for morphology-free analysis of functional fluorescence microscopy. The focal algorithm, Graph-Filtered Ti…☆15Updated 2 years ago
- ☆10Updated 2 years ago
- vandermeerlab code base☆17Updated 4 months ago
- Histology processing☆72Updated last month
- Algorithm for automated source extraction from 1P data☆23Updated 2 years ago
- CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.☆13Updated 2 years ago