Rappsilber-Laboratory / AlphaLink2Links
AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
☆58Updated 3 months ago
Alternatives and similar repositories for AlphaLink2
Users that are interested in AlphaLink2 are comparing it to the libraries listed below
Sorting:
- ☆88Updated last year
- AlphaLink: Integrating crosslinking MS data into OpenFold☆71Updated last year
- ☆71Updated 8 months ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆70Updated last year
- ☆47Updated 10 months ago
- Efficient manipulation of protein structures in Python☆60Updated 2 months ago
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆66Updated 2 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 5 months ago
- Structure prediction of alternative protein conformations☆80Updated 9 months ago
- ☆54Updated 3 months ago
- Ultra-fast in-silico structure mutation☆35Updated 8 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆107Updated 4 months ago
- Modelling of Large Protein Complexes☆38Updated 4 months ago
- Source code and examples for AlphaFold Unmasked☆75Updated 2 weeks ago
- Template-based protein design with Raygun☆76Updated last week
- Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.☆98Updated 3 weeks ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆82Updated 4 months ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆98Updated 2 years ago
- Metrics for our protein design competitions.☆35Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- Public version for Distance-AF☆28Updated 3 months ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)…☆62Updated last month
- ☆92Updated last month
- ☆21Updated 2 years ago
- A Unified Approach to Protein Engineering☆42Updated last year
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆55Updated 7 months ago
- MiniFold: Simple, Fast and Accurate Protein Structure Prediction☆77Updated 4 months ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆58Updated last month
- Python package to manage protein structures and their annotations☆45Updated last year