Rappsilber-Laboratory / AlphaLink2Links
AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
☆60Updated 4 months ago
Alternatives and similar repositories for AlphaLink2
Users that are interested in AlphaLink2 are comparing it to the libraries listed below
Sorting:
- ☆88Updated last year
- AlphaLink: Integrating crosslinking MS data into OpenFold☆72Updated 2 years ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆70Updated last year
- ☆47Updated 11 months ago
- Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.☆99Updated this week
- Bioinformatics and Cheminformatics protocols for peptide analysis☆44Updated 3 years ago
- Efficient manipulation of protein structures in Python☆60Updated 3 months ago
- Structure prediction of alternative protein conformations☆80Updated 10 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆43Updated 7 months ago
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆66Updated 3 months ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆98Updated 2 years ago
- ☆31Updated last year
- Python package to manage protein structures and their annotations☆45Updated last year
- ☆41Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆85Updated 2 weeks ago
- Modelling of Large Protein Complexes☆39Updated 4 months ago
- ML toolset for creating TED: The Encyclopedia of Domains☆25Updated 6 months ago
- Template-based protein design with Raygun☆76Updated 3 weeks ago
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆110Updated last month
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 5 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆76Updated 2 months ago
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆55Updated 8 months ago
- Source code and examples for AlphaFold Unmasked☆77Updated last month
- ☆72Updated 9 months ago
- ☆54Updated 4 months ago
- ☆21Updated 2 years ago
- ☆93Updated 2 months ago
- Machine learning prediction of enzyme optimum pH☆48Updated 7 months ago
- Ultra-fast in-silico structure mutation☆36Updated 8 months ago