songlab-cal / mogwai
☆25Updated 2 years ago
Alternatives and similar repositories for mogwai:
Users that are interested in mogwai are comparing it to the libraries listed below
- ☆34Updated 4 years ago
- Universal Transforming Geometric Network for protein structure prediction.☆8Updated 4 years ago
- Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox☆20Updated 6 years ago
- This repository contains code for reproducing results in our paper Interpreting Potts and Transformer Protein Models Through the Lens of …☆58Updated 2 years ago
- ☆30Updated 4 years ago
- PLM-interact: extending protein language models to predict protein-protein interactions.☆18Updated 2 months ago
- Deep convolutional networks for fold recognition☆22Updated 5 years ago
- ☆17Updated 2 weeks ago
- Source code for ICLR 2021 paper: "Molecule Optimization by Explainable Evolution"☆28Updated 3 years ago
- Homology reduced UniProt, train-/valid-/testsets for language modeling☆16Updated 2 years ago
- Inpainting protein sequence and structure☆12Updated last year
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆34Updated 3 years ago
- ☆33Updated 3 years ago
- Epistatic Net is an algorithm which allows for spectral regularization of deep neural networks to predict biological fitness functions (e…☆18Updated 3 years ago
- Prediction of protein substitution impact using a directional substitution matrix and homolog alignments☆12Updated 3 years ago
- DistilProtBert implementation, a distilled version of ProtBert model.☆15Updated 2 years ago
- Linear-Time Approximation of RNA Folding Partition Function and Base Pairing Probabilities☆29Updated 9 months ago
- A tool for predicting the effects of missense mutations on protein stability changes upon missense mutation using protein sequence only. …☆22Updated last year
- ☆35Updated 5 years ago
- ☆18Updated 7 years ago
- Code for ICML 2023 paper "Reprogramming Pretrained Language Models for Antibody Sequence Infilling"☆23Updated last year
- An end-to-end linear-time algorithm for structural alignment and conserved structure prediction of RNA homologs☆11Updated 8 months ago
- pytorch implementation of trDesign☆45Updated 3 years ago
- SE(3)-equivariant point cloud networks for virtual screening☆20Updated last year
- Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"☆11Updated last year
- De novo protein structure prediction using iteratively predicted structural constraints☆56Updated 3 years ago
- Drug Discovery under Covariate Shift with Domain-Informed Prior Distributions over Functions☆24Updated last year
- ☆16Updated 9 months ago
- Massively-Parallel Natural Extension of Reference Frame☆30Updated 2 years ago
- ☆29Updated 4 years ago