Alternatives and similar repositories for DMPfold2

Users that are interested in DMPfold2 are comparing it to the libraries listed below

• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆54Updated 2 months ago
• minmarg / gtalign_alpha
  GTalign, HPC protein structure alignment, superposition and search (alpha release)
  ☆45Updated 2 weeks ago
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆38Updated last year
• cmbi / dssp
  The DSSP building software
  ☆44Updated last year
• Rappsilber-Laboratory / AlphaLink2
  AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
  ☆57Updated last month
• JudeWells / chainsaw
  ☆40Updated 9 months ago
• SNU-CSSB / RF2-Lite
  ☆30Updated last year
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆88Updated last year
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆34Updated 3 years ago
• AbSciBio / igdesign
  ☆41Updated 5 months ago
• pylelab / rMSA
  RNA Multiple Sequence Alignment
  ☆42Updated last year
• maslov-group / DR-BERT
  ☆24Updated 2 years ago
• rohitsinghlab / raygun
  Template-based protein design with Raygun
  ☆69Updated last week
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆43Updated last year
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 2 months ago
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆32Updated last year
• swanss / FragFold
  Fragment binding prediction with ColabFold
  ☆35Updated 3 months ago
• KIT-MBS / pydca
  Direct coupling analysis software for protein and RNA sequences
  ☆50Updated last month
• clami66 / AF_unmasked
  Source code and examples for AlphaFold Unmasked
  ☆68Updated last month
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆49Updated 7 months ago
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆66Updated 7 years ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆59Updated 4 years ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆40Updated last month
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆57Updated 6 months ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆66Updated 10 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆62Updated 4 months ago
• the-protein-engineering-tournament / pet-pilot-2023
  Results and data from the pilot round of the Protein Engineering Tournament
  ☆29Updated 3 months ago
• biofold / ddgun
  predict stability change upon mutation
  ☆28Updated 11 months ago
• StatPhysBio / protein_holography
  Code for holographic machine learning of proteins
  ☆24Updated 7 months ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆44Updated last month