Alternatives and similar repositories for DeepDom

Users that are interested in DeepDom are comparing it to the libraries listed below

• MartinThoma / propy3
  A Python 3 version of the protein descriptor package propy
  ☆42Updated 2 years ago
• ElwynWang / DeepFragLib
  ☆29Updated 4 years ago
• Graylab / deepH3-distances-orientations
  ☆34Updated 3 years ago
• dohlee / antiberty-pytorch
  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
  ☆24Updated last year
• lijunRNA / RNA3DCNN
  to assess structural quality of RNA using 3D CNN
  ☆13Updated 6 years ago
• ElofssonLab / PconsC4
  Fast and easy contact prediction.
  ☆38Updated last year
• bigict / ProDESIGN-LE
  An accurate and efficient protein sequence design approach
  ☆24Updated 2 months ago
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆30Updated last year
• wendao / CAGE-Prox
  Computer aided proximal decaging as a universal strategy for temporal protein activation
  ☆23Updated last week
• Nucleus2014 / protease-gcnn-pytorch
  ☆19Updated last year
• vamships / PECAN
  Help file for running the scripts to learn and evaluate graph convolution networks for epitope and paratope prediction
  ☆34Updated 4 years ago
• compbiomed-unito / acdc-nn
  ☆21Updated 2 years ago
• Lailabcode / DeepSCM
  A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict an…
  ☆26Updated 2 years ago
• tommyhuangthu / EvoEF2
  Physical energy function for protein sequence design
  ☆30Updated 2 years ago
• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆37Updated 2 years ago
• dahjan / DMS_opt
  ☆68Updated 4 years ago
• KeatingLab / PixelDB
  ☆13Updated 7 years ago
• Tessier-Lab-UMich / Emi_Pareto_Opt_ML
  ☆20Updated 2 years ago
• enai4bio / DeepAAI
  DeepAAI
  ☆31Updated 5 months ago
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆41Updated 2 years ago
• RosettaCommons / Rosetta-DL
  A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
  ☆35Updated 2 years ago
• FTD007 / PInet
  ☆25Updated 3 years ago
• Furman-Lab / PatchMAN
  ☆26Updated last month
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆59Updated 10 months ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆40Updated 2 weeks ago
• xzenglab / TAGPPI
  ☆20Updated 2 years ago
• alexarnimueller / LSTM_peptides
  Long short-term memory recurrent neural networks for learning peptide and protein sequences to later design new, similar examples.
  ☆75Updated 2 years ago
• psipred / DeepCov
  Fully convolutional neural networks for protein residue-residue contact prediction
  ☆44Updated 6 years ago
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆32Updated 6 years ago
• Protein-Engineering-Framework / PyPEF
  PyPEF – Pythonic Protein Engineering Framework
  ☆24Updated last week