ShintaroMinami / PyDSSPLinks
A simplified implementation of DSSP algorithm for PyTorch and NumPy
☆88Updated last month
Alternatives and similar repositories for PyDSSP
Users that are interested in PyDSSP are comparing it to the libraries listed below
Sorting:
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆63Updated 3 months ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆96Updated last year
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆67Updated 10 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆110Updated 3 weeks ago
- ☆171Updated last week
- ☆109Updated 2 years ago
- ☆70Updated 5 months ago
- Source code and examples for AlphaFold Unmasked☆71Updated last month
- ☆84Updated 9 months ago
- Structure prediction of alternative protein conformations☆76Updated 4 months ago
- Python interface for the RCSB PDB search API.☆64Updated 3 months ago
- ☆100Updated last month
- Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.☆79Updated last week
- ☆50Updated 3 weeks ago
- ☆43Updated 10 months ago
- ☆117Updated 2 years ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆158Updated 4 months ago
- ☆81Updated last month
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆63Updated 5 months ago
- Protein folding in Pymol☆109Updated 6 months ago
- Modelling of Large Protein Complexes☆37Updated last year
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆98Updated 11 months ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆40Updated last week
- Official repository of EnzymeFlow☆91Updated 7 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆60Updated 2 weeks ago
- Open source code for AlphaFold.☆39Updated 2 years ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆93Updated 3 weeks ago
- ☆68Updated last year
- It's a package for evaluation of predicted poses, right?☆58Updated last week