UCL / cathpyLinks
Python Bioinformatics Toolkit for CATH (Protein Classification Database @ UCL)
☆14Updated 10 months ago
Alternatives and similar repositories for cathpy
Users that are interested in cathpy are comparing it to the libraries listed below
Sorting:
- Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing☆23Updated 4 years ago
- ☆31Updated 3 years ago
- Pseudo Likelihood Maximization for protein in Julia☆51Updated 2 months ago
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆36Updated 4 years ago
- Deep convolutional networks for fold recognition☆22Updated 5 years ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆39Updated 2 years ago
- Code used in the manuscript for De Novo Design of Bioactive Protein Switches☆16Updated 6 years ago
- Multivariate Gaussian Direct Coupling Analysis for residue contact prediction in protein families - Julia module☆22Updated 3 years ago
- ☆18Updated 5 months ago
- Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'☆24Updated last year
- Fast and accurate protein structure prediction☆53Updated 6 months ago
- Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox☆20Updated 6 years ago
- ☆18Updated 7 years ago
- A web app to convert a PyMOL PSE file or PDB file to a easy to implement NGL.js view that can be implemented easily on any site☆12Updated 3 years ago
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆27Updated last year
- We introduce a differentiable approach to phylogenetic tree construction, optimizing tree and ancestral sequences in its original represe…☆20Updated last year
- ☆25Updated 3 years ago
- Screen interactions with AlphaFold Multimer☆11Updated 4 months ago
- Normal Mode Analysis for Macromolecules☆18Updated 8 years ago
- ☆14Updated 5 years ago
- Massively-Parallel Natural Extension of Reference Frame☆32Updated 2 years ago
- ☆36Updated 6 years ago
- mGPfusion is a Gaussian process based method for predicting stability changes upon single and multiple mutations of proteins that comple…☆15Updated 7 years ago
- Web cards/apps describing peptides☆29Updated 2 years ago
- Printing text using protein structures☆13Updated 4 years ago
- Boltzmann machine learning for Potts models of biological data☆12Updated last year
- A Deep Learning based protein flexibility prediction tool.☆9Updated 2 years ago
- De novo protein structure prediction using iteratively predicted structural constraints☆58Updated 3 years ago
- a toolbox for the manipulation, modelling and analysis of molecular structures☆27Updated 9 months ago
- Autoregressive networks for protein☆38Updated 5 months ago