Python Bioinformatics Toolkit for CATH (Protein Classification Database @ UCL)
☆17Sep 30, 2024Updated last year
Alternatives and similar repositories for cathpy
Users that are interested in cathpy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Protein common interface databases☆10Apr 13, 2019Updated 6 years ago
- Docking benchmark 5 - cleaned and ready to use for HADDOCK☆14Nov 17, 2025Updated 4 months ago
- Energy-based Graph Convolutional Networks for Scoring Protein Docking Models☆12Aug 31, 2021Updated 4 years ago
- Interactive plotting of millions of data points☆11Mar 31, 2022Updated 4 years ago
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆36May 30, 2021Updated 4 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'☆30Jan 8, 2024Updated 2 years ago
- ZDOCK predictions and PDB structures in C++ and Python☆14Jan 1, 2024Updated 2 years ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆46May 22, 2025Updated 10 months ago
- Deep neural networks implemented in TensorFlow & Python for predicting whether transcription factors will bind to given DNA sequences☆15Dec 9, 2016Updated 9 years ago
- ATTRACT program suite for macromolecular docking (protein-protein, protein-nucleic acid, protein-peptide)☆19Mar 13, 2026Updated 3 weeks ago
- Auto-differentiated descriptors using Enzyme☆12Apr 2, 2025Updated last year
- Screen interactions with AlphaFold Multimer☆14Mar 10, 2025Updated last year
- Protein structure comparison tools such as SSAP and SNAP☆67Nov 10, 2023Updated 2 years ago
- ChainRulesCore compatible pullbacks using ForwardDiff☆13Mar 30, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ProtT5 (Transformer) embeddings used for residue wise disorder prediction in proteins☆11Mar 11, 2024Updated 2 years ago
- inferring RBP binding sites and motifs using local and global CNNs☆19Sep 29, 2019Updated 6 years ago
- A Gene Finder framework for Julia.☆16Jan 16, 2026Updated 2 months ago
- ☆10Updated this week
- ☆12Jan 27, 2025Updated last year
- PDBe Programming Interfaces information☆14Jul 23, 2018Updated 7 years ago
- A web app to convert a PyMOL PSE file or PDB file to a easy to implement NGL.js view that can be implemented easily on any site☆12Nov 12, 2021Updated 4 years ago
- Wrapper to protein secondary structure calculation packages☆13Apr 3, 2025Updated last year
- ☆12Jan 12, 2015Updated 11 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- A collection of TTFX workloads for Julia packages, for longitudinal performance testing.☆20Nov 17, 2025Updated 4 months ago
- An R package to call oomycete effectors☆11Aug 31, 2023Updated 2 years ago
- ☆34Jul 3, 2024Updated last year
- Ligand-Receptor docking with AutoDock Vina☆12Mar 21, 2024Updated 2 years ago
- Normal Mode Analysis for Macromolecules☆18Apr 1, 2017Updated 9 years ago
- (Julia 0.5 only) Concept still good, but needs updating for julia 1.0☆13Feb 8, 2020Updated 6 years ago
- 📦 A Command Line Tool for downloading protein structures, sequences and MSAs☆10Nov 21, 2017Updated 8 years ago
- ☆19Aug 29, 2025Updated 7 months ago
- Motif Scan and Enrichment Analysis (MoSEA)☆17Oct 6, 2020Updated 5 years ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- A common suite of test functions for stressing the robustness of differentiation tools.☆12Jun 23, 2023Updated 2 years ago
- Convert PDB residues to their Uniprot equivalents☆17Mar 31, 2020Updated 6 years ago
- McDock: Simple Monte Carlo docking algorithm in C++☆11Feb 10, 2017Updated 9 years ago
- TMol☆72Updated this week
- Protein structural disorder prediction☆20Nov 21, 2024Updated last year
- A number format that you can count with your fingers.☆23Jan 1, 2026Updated 3 months ago
- Package AutoDock Vina, ADFR suite, Meeko, MGLTools into Docker Image.☆14Jan 17, 2025Updated last year