UCL / cathpy
Python Bioinformatics Toolkit for CATH (Protein Classification Database @ UCL)
☆14Updated 4 months ago
Alternatives and similar repositories for cathpy:
Users that are interested in cathpy are comparing it to the libraries listed below
- Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing☆23Updated 3 years ago
- ☆18Updated 7 years ago
- Code used in the manuscript for De Novo Design of Bioactive Protein Switches☆16Updated 5 years ago
- ☆30Updated 4 years ago
- Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox☆20Updated 6 years ago
- Fast and accurate protein structure prediction☆49Updated last month
- Massively-Parallel Natural Extension of Reference Frame☆30Updated 2 years ago
- ☆17Updated 2 months ago
- mGPfusion is a Gaussian process based method for predicting stability changes upon single and multiple mutations of proteins that comple…☆15Updated 6 years ago
- Deep convolutional networks for fold recognition☆22Updated 5 years ago
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆27Updated 2 years ago
- Printing text using protein structures☆13Updated 3 years ago
- Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'☆22Updated last year
- Multivariate Gaussian Direct Coupling Analysis for residue contact prediction in protein families - Julia module☆22Updated 3 years ago
- ☆20Updated 3 years ago
- Non-sequential structural alignment program for protein structure☆18Updated 3 months ago
- ☆35Updated 5 years ago
- Autoregressive networks for protein☆36Updated last month
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆34Updated 3 years ago
- Pseudo Likelihood Maximization for protein in Julia☆50Updated last month
- Normal Mode Analysis for Macromolecules☆15Updated 7 years ago
- Screen interactions with AlphaFold Multimer☆10Updated 3 months ago
- De novo protein structure prediction using iteratively predicted structural constraints☆55Updated 3 years ago
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 2 years ago
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆37Updated last year
- ☆31Updated 3 years ago
- ☆12Updated 2 years ago
- Pytorch implementation of BionoiNet, which is a deep learning-based software to classify ligand-binding sites.☆20Updated 3 years ago
- fragbuilder is a tool to create, setup and analyze QM calculations on peptides.☆14Updated 10 years ago
- Web cards/apps describing peptides☆27Updated last year