msternke / protein-consensus-sequenceLinks
A set a basic Python scripts to edit a multiple sequence alignment and generate a protein consensus sequence
☆17Updated 2 years ago
Alternatives and similar repositories for protein-consensus-sequence
Users that are interested in protein-consensus-sequence are comparing it to the libraries listed below
Sorting:
- Fast protein domain structure embedding+search tool☆21Updated 2 weeks ago
- ☆22Updated last year
- ☆39Updated 8 months ago
- Feature map and function annotation of Proteins☆33Updated 11 months ago
- A domain parser for Alphafold models☆38Updated last year
- ☆21Updated 2 weeks ago
- Code for LazyAF pipeline☆20Updated last year
- ☆30Updated last year
- Conservation analysis of homologous proteins with Python☆11Updated 3 years ago
- Rendering protein mutation movies from predicted 3D structures☆20Updated last year
- Python framework for doing ancestral sequence reconstruction☆38Updated 10 months ago
- EPSAPG: An Extensive Protein Sequence Alignment Profiles Generator Pipeline Combining MMseqs2 and PSI-BLAST☆11Updated last year
- Evolutionary conservation estimation of residues or nucleotides☆42Updated 3 years ago
- PLMAlign utilizes per-residue embeddings as input to obtain specific alignments and more refined similarity☆20Updated 5 months ago
- DeepECtransformer☆24Updated last year
- The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.☆19Updated last year
- Peptide library design☆23Updated 4 years ago
- Detection of remote homology by comparison of protein language model representations☆53Updated 5 months ago
- ☆16Updated 3 years ago
- Transmembrane proteins predicted through Language Model embeddings☆36Updated 3 weeks ago
- Long disorder consensus predictor☆14Updated 3 months ago
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆12Updated 2 years ago
- ☆68Updated 8 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆22Updated 3 weeks ago
- ☆30Updated last year
- Pipeline for protein-protein interaction prediction☆23Updated 3 years ago
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆16Updated 2 years ago
- ☆11Updated 5 months ago
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- Protein Origami via Genetic Fusions☆13Updated 2 years ago