Alternatives and similar repositories for ted-tools:

Users that are interested in ted-tools are comparing it to the libraries listed below

• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆26Updated last year
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆31Updated 2 months ago
• johnnytam100 / AlphaCutter
  This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.
  ☆15Updated last year
• bene837 / af2seq
  ☆41Updated 4 months ago
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆32Updated last year
• Nucleus2014 / protease-gcnn-pytorch
  ☆20Updated last year
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆29Updated last week
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆20Updated 2 weeks ago
• UCLOrengoGroup / cath-alphaflow
  ☆17Updated 2 months ago
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆27Updated 5 months ago
• PKUliujl / GeoSeqBuilder
  ☆24Updated 2 weeks ago
• KULL-Centre / _2024_cagiada_stability
  ☆60Updated last month
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆40Updated last month
• HannesStark / CodonMPNN
  ☆24Updated last month
• KosinskiLab / alphafold3x
  Explicit crosslinks in AlphaFold 3
  ☆15Updated last month
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆35Updated 2 months ago
• bwicky / oligomer_hallucination
  ☆36Updated last year
• SNU-CSSB / RF2-Lite
  ☆25Updated 7 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆31Updated 2 months ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆65Updated 5 months ago
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆18Updated last month
• ohuelab / ColabDesign-cyclic-binder
  ☆29Updated last year
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆32Updated 4 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆36Updated 4 months ago
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆30Updated 6 years ago
• haddocking / arctic3d
  Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information
  ☆28Updated last week
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆26Updated 9 months ago
• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆38Updated 8 months ago
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆17Updated 6 months ago