Alternatives and similar repositories for ted-tools

Users that are interested in ted-tools are comparing it to the libraries listed below

• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆48Updated 7 months ago
• UCLOrengoGroup / cath-alphaflow
  ☆23Updated 3 weeks ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆42Updated 6 months ago
• JudeWells / chainsaw
  ☆44Updated last year
• Nucleus2014 / protease-gcnn-pytorch
  ☆21Updated 2 years ago
• SNU-CSSB / RF2-Lite
  ☆31Updated last year
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆33Updated last year
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆37Updated 2 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆71Updated 8 months ago
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆45Updated last year
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆49Updated 2 months ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆29Updated 5 months ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆35Updated 2 years ago
• minmarg / gtalign_alpha
  GTalign, high-performance protein structure alignment, superposition and search
  ☆52Updated 3 months ago
• JinyuanSun / DDGScan
  DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein
  ☆49Updated last year
• bouralab / Prop3D
  A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…
  ☆38Updated last year
• dina-lab3D / CombFold
  ☆88Updated last year
• silicogenesis / protkit
  A Unified Approach to Protein Engineering
  ☆42Updated last year
• mjendrusch / salad
  protein structure generation with sparse all-atom denoising models
  ☆50Updated 2 months ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆60Updated 2 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆54Updated 3 months ago
• jafetgado / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆21Updated 7 months ago
• t03i / FlatProt
  A tool for 2D protein visualization aimed at improving the comparability of protein structures through standardized 2D visualizations.
  ☆19Updated 4 months ago
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆43Updated 2 years ago
• Rappsilber-Laboratory / AlphaLink2
  AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
  ☆58Updated 3 months ago
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆66Updated last year
• jwohlwend / minifold
  MiniFold: Simple, Fast and Accurate Protein Structure Prediction
  ☆77Updated 4 months ago
• Rocklin-Lab / cdna-display-proteolysis-pipeline
  ☆25Updated 2 years ago
• wells-wood-research / PDBench
  PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.
  ☆30Updated 2 years ago
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆35Updated 8 months ago