psipred / ted-toolsLinks
ML toolset for creating TED: The Encyclopedia of Domains
☆24Updated 4 months ago
Alternatives and similar repositories for ted-tools
Users that are interested in ted-tools are comparing it to the libraries listed below
Sorting:
- Machine learning prediction of enzyme optimum pH☆45Updated 5 months ago
- ☆23Updated 4 months ago
- Graph Network for protein-protein interface including language model features☆32Updated last year
- ☆30Updated last year
- Kuhlman Lab Installation of AlphaFold3☆34Updated last week
- Fast and accurate protein domain segmentation using Invariant Point Attention☆41Updated 4 months ago
- ☆21Updated last year
- ☆71Updated 6 months ago
- This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…☆19Updated 9 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 3 months ago
- ☆86Updated last year
- Python package to manage protein structures and their annotations☆44Updated last year
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆58Updated last month
- ☆53Updated last month
- A Unified Approach to Protein Engineering☆42Updated last year
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆32Updated last year
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- Extension of ThermoMPNN for double mutant predictions☆43Updated 2 months ago
- Physical energy function for protein sequence design☆33Updated 2 years ago
- GTalign, high-performance protein structure alignment, superposition and search☆50Updated last month
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆17Updated last year
- ☆43Updated last year
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- Efficient manipulation of protein structures in Python☆58Updated last week
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- Fragment binding prediction with ColabFold☆37Updated 6 months ago
- Explicit crosslinks in AlphaFold 3☆23Updated 6 months ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆48Updated last year
- ☆41Updated last year
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago