code for SeqDance/ESMDance, biophysics-informed protein language models
☆61Jan 28, 2026Updated 6 months ago
Alternatives and similar repositories for SeqDance
Users that are interested in SeqDance are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Deconvolving mutation effects on protein stability and function with disentangled protein language models☆18May 15, 2026Updated 2 months ago
- ESMDynamic repo☆25Jun 26, 2026Updated last month
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆62Dec 16, 2025Updated 7 months ago
- ☆48Mar 7, 2026Updated 5 months ago
- Deep generative modeling of protein structural ensembles☆41May 27, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- ☆40Jun 17, 2025Updated last year
- ☆35Feb 4, 2026Updated 6 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆37Nov 5, 2025Updated 9 months ago
- Pretrained METL models with minimal dependencies☆16Sep 18, 2025Updated 10 months ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆177Jun 25, 2026Updated last month
- Benchmarking code accompanying the release of `bioemu`☆65Jul 21, 2026Updated 2 weeks ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 8 months ago
- DynamicGT: a dynamic-aware geometric transformer model to predict protein binding interfaces in flexible and disordered regions☆16Jun 18, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆20Oct 3, 2024Updated last year
- ☆15Mar 28, 2025Updated last year
- Protein stability prediction using rewired protein generative models☆90Jul 15, 2026Updated 3 weeks ago
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆85May 27, 2026Updated 2 months ago
- ☆101Feb 14, 2024Updated 2 years ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆64Feb 3, 2026Updated 6 months ago
- Generative modeling of molecular dynamics trajectories☆224Mar 22, 2026Updated 4 months ago
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆261Nov 5, 2025Updated 9 months ago
- MDPath - A tool for calculating allosteric communication pathways in proteins by analyzing the mutual information of residue dihedral ang…☆31Jul 27, 2026Updated 2 weeks ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Homomer symmetry prediction from protein sequence☆46Mar 13, 2025Updated last year
- Protein Language Modeling beyond static folds reveals sequence-encoded flexibility☆37Feb 1, 2026Updated 6 months ago
- Scripts for the creation of CryptoBench, a new dataset of cryptic binding sites☆18Jun 24, 2026Updated last month
- Generate intrinsically disordered peptide conformations via machine learning☆25May 26, 2024Updated 2 years ago
- ☆33Jul 7, 2026Updated last month
- ☆52Jan 2, 2025Updated last year
- ☆27Mar 12, 2026Updated 4 months ago
- T-ALPHA: a hierarchical transformer-based deep neural network for protein-ligand binding affinity prediction with uncertainty-aware self-…☆32Feb 24, 2025Updated last year
- ☆15Jun 25, 2026Updated last month
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆25Jun 10, 2026Updated 2 months ago
- Versatile Embedding Network for Understanding protein Sequences☆26May 16, 2025Updated last year
- Protein-peptide docking with ESMFold language model☆16May 30, 2026Updated 2 months ago
- Inference code for scalable emulation of protein equilibrium ensembles with generative deep learning☆862Updated this week
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆257Jan 3, 2026Updated 7 months ago
- Protein-Ligand Binding Affinity Prediction with GNN and Transfer Learning From Protein Language Models☆84Jul 22, 2026Updated 2 weeks ago
- Convert coarse-grained protein structure to all-atom model☆62Jun 7, 2025Updated last year