Alternatives and similar repositories for biobox

Users that are interested in biobox are comparing it to the libraries listed below

• YoshidomeGroup-Hydration / gr-predictor
  ☆15Updated 2 weeks ago
• CSB-KaracaLab / prot-on
  This repo contains the collection of codes to find designer interfacial mutations
  ☆17Updated 2 years ago
• RUBi-ZA / MODE-TASK
  PCA and normal mode analysis of proteins
  ☆18Updated last year
• jscant / PointVS
  SE(3)-equivariant point cloud networks for virtual screening
  ☆21Updated 2 years ago
• fimrie / DenseFS
  ☆11Updated last year
• agrybauskas / rotag
  A collection of tools that generate and analyse side-chain rotamer libraries
  ☆10Updated this week
• ur-whitelab / peptide-dashboard
  Web cards/apps describing peptides
  ☆30Updated 2 years ago
• kamerlinlab / KIN
  Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…
  ☆18Updated last year
• julie-forman-kay-lab / IDPConformerGenerator
  Build conformational representations of Intrinsically Disordered Proteins and Regions by a guided sampling of the protein torsion space
  ☆27Updated last week
• wells-wood-research / alphafold2-multiprocessing
  Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing
  ☆23Updated 4 years ago
• tiwarylab / State-Predictive-Information-Bottleneck
  ☆26Updated 2 years ago
• ur-whitelab / wazy
  Bayesian Optimization with Pretrained Protein Sequence Models
  ☆56Updated last year
• dkoes / GNINA-1.0
  Paper for release
  ☆11Updated 3 years ago
• sokrypton / tf_proteins
  some tools for working with protein (PDB) files in tensorflow
  ☆11Updated 6 years ago
• Dankem / pyGROMODS
  Python based Graphical User Interface for generating input files for and running molecular dynamic simulation.
  ☆10Updated last year
• NRGlab / ENCoM
  Elastic Network Contact Model (coarse-grained Normal Mode Analysis software)
  ☆14Updated 8 years ago
• ELELAB / pyinteraph2
  development repository for PyInteraph2
  ☆23Updated 5 months ago
• ChenGiuseppe / PyMM
  A Python program for QM/MM Simulations based on the Perturbed Matrix Method
  ☆26Updated last year
• DLab / RIP-MD
  ☆15Updated 7 years ago
• mirabdi / PDAnalysis
  ☆32Updated last year
• yuxuanzhuang / ggmolvis
  Molecular visualization for MDAnalysis with MolecularNodes in Blender
  ☆17Updated 5 months ago
• cbouy / ProLIF
  Protein-Ligand Interaction Fingerprints
  ☆20Updated 4 years ago
• choderalab / neutromeratio
  Tautomer ratios in solution
  ☆26Updated 4 years ago
• CompBiochBiophLab / sbm-openmm
  Python library to run structure based model (SBM) simulations using the OpenMM toolkit
  ☆23Updated 3 years ago
• sbliven / rcsbsearch
  Python interface for the RCSB search API.
  ☆20Updated last year
• johnyang101 / pmpnndiff
  Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion
  ☆17Updated last year
• moldyn / Clustering
  Robust and stable clustering of molecular dynamics simulation trajectories.
  ☆18Updated 3 years ago
• programmablebio / saltnpeppr
  An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders
  ☆16Updated last year
• shirtsgroup / cg_openmm
  Tools to build coarse grained models and perform simulations with OpenMM
  ☆24Updated 2 years ago
• CCPBioSim / CCP5_Simulation_of_BioMolecules
  ☆16Updated last month